FFCP PHASE1:Mm9::chr7:114836782..114836792,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=95|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:114836782..114836792,+|id=chr7:114836782..114836792,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006554!4.23e-18!16;UBERON:0001008!6.28e-17!17;UBERON:0005153!6.40e-14!17;UBERON:0002048!1.80e-13!14;UBERON:0000117!1.80e-13!14;UBERON:0000171!1.80e-13!14;UBERON:0000170!1.80e-13!14;UBERON:0005597!1.80e-13!14;UBERON:0000118!1.80e-13!14;UBERON:0002113!5.58e-13!14;UBERON:0003918!5.58e-13!14;UBERON:0005095!5.58e-13!14;UBERON:0007687!5.58e-13!14;UBERON:0009569!8.27e-12!66;UBERON:0005178!7.14e-11!17;UBERON:0005181!7.14e-11!17;UBERON:0002224!7.14e-11!17;UBERON:0000915!7.14e-11!17;UBERON:0008947!7.14e-11!17;UBERON:0003258!7.14e-11!17;UBERON:0000489!1.20e-10!21;UBERON:0005177!1.30e-09!85;UBERON:0002100!5.72e-09!98;UBERON:0005157!3.44e-08!27;UBERON:0010147!5.50e-08!2;UBERON:0003937!5.50e-08!2;UBERON:0005399!5.50e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0001255,2.87e-30,1;UBERON:0001556,2.87e-30,1;UBERON:0000998,5.62e-30,1;UBERON:0007194,5.62e-30,1;UBERON:0006868,5.62e-30,1;UBERON:0006834,1.10e-29,1;UBERON:0010147,9.49e-16,2;UBERON:0003937,9.49e-16,2;UBERON:0005399,9.49e-16,2;UBERON:0004175,6.62e-14,9;UBERON:0000162,4.56e-11,3;UBERON:0001353,4.56e-11,3;UBERON:0000163,4.56e-11,3;UBERON:0006866,4.56e-11,3;UBERON:0001046,4.56e-11,3;UBERON:0000164,4.56e-11,3;UBERON:0000931,4.56e-11,3;UBERON:0003064,1.96e-09,14;UBERON:0000080,1.46e-08,4;UBERON:0005904,1.46e-08,4;UBERON:0006947,1.46e-08,4;UBERON:0002120,1.46e-08,4;UBERON:0004054,1.46e-08,4;UBERON:0004875,1.46e-08,4;UBERON:0004876,1.46e-08,4;UBERON:0005721,1.46e-08,4;UBERON:0005754,1.46e-08,4;UBERON:0007297,1.46e-08,4;UBERON:0005795,1.73e-08,4;UBERON:0000995,1.73e-08,4;UBERON:0006554,1.41e-07,18;UBERON:0001008,3.11e-07,19;UBERON:0000161,3.64e-07,5;UBERON:0004122,3.64e-07,5;UBERON:0003975,4.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79568782096571,1.31377732815827,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr7:114836782..114836792,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=95 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:114836782..114836792,+ | |||
|id=chr7:114836782..114836792,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!4.23e-18!16;UBERON:0001008!6.28e-17!17;UBERON:0005153!6.40e-14!17;UBERON:0002048!1.80e-13!14;UBERON:0000117!1.80e-13!14;UBERON:0000171!1.80e-13!14;UBERON:0000170!1.80e-13!14;UBERON:0005597!1.80e-13!14;UBERON:0000118!1.80e-13!14;UBERON:0002113!5.58e-13!14;UBERON:0003918!5.58e-13!14;UBERON:0005095!5.58e-13!14;UBERON:0007687!5.58e-13!14;UBERON:0009569!8.27e-12!66;UBERON:0005178!7.14e-11!17;UBERON:0005181!7.14e-11!17;UBERON:0002224!7.14e-11!17;UBERON:0000915!7.14e-11!17;UBERON:0008947!7.14e-11!17;UBERON:0003258!7.14e-11!17;UBERON:0000489!1.20e-10!21;UBERON:0005177!1.30e-09!85;UBERON:0002100!5.72e-09!98;UBERON:0005157!3.44e-08!27;UBERON:0010147!5.50e-08!2;UBERON:0003937!5.50e-08!2;UBERON:0005399!5.50e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,2.87e-30,1;UBERON:0001556,2.87e-30,1;UBERON:0000998,5.62e-30,1;UBERON:0007194,5.62e-30,1;UBERON:0006868,5.62e-30,1;UBERON:0006834,1.10e-29,1;UBERON:0010147,9.49e-16,2;UBERON:0003937,9.49e-16,2;UBERON:0005399,9.49e-16,2;UBERON:0004175,6.62e-14,9;UBERON:0000162,4.56e-11,3;UBERON:0001353,4.56e-11,3;UBERON:0000163,4.56e-11,3;UBERON:0006866,4.56e-11,3;UBERON:0001046,4.56e-11,3;UBERON:0000164,4.56e-11,3;UBERON:0000931,4.56e-11,3;UBERON:0003064,1.96e-09,14;UBERON:0000080,1.46e-08,4;UBERON:0005904,1.46e-08,4;UBERON:0006947,1.46e-08,4;UBERON:0002120,1.46e-08,4;UBERON:0004054,1.46e-08,4;UBERON:0004875,1.46e-08,4;UBERON:0004876,1.46e-08,4;UBERON:0005721,1.46e-08,4;UBERON:0005754,1.46e-08,4;UBERON:0007297,1.46e-08,4;UBERON:0005795,1.73e-08,4;UBERON:0000995,1.73e-08,4;UBERON:0006554,1.41e-07,18;UBERON:0001008,3.11e-07,19;UBERON:0000161,3.64e-07,5;UBERON:0004122,3.64e-07,5;UBERON:0003975,4.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79568782096571,1.31377732815827,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr7:114836782..114836792,+ | |||
}} |
Revision as of 11:25, 14 September 2013
Short description: | p@chr7:114836782..114836792, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:114836782..114836792, + |
Coexpression cluster: | MCL_coexpression_mm9:95 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary bladder | 2.87e-30 | 1 |
lower urinary tract | 2.87e-30 | 1 |
seminal vesicle | 5.62e-30 | 1 |
vesicular gland | 5.62e-30 | 1 |
seminal fluid secreting gland | 5.62e-30 | 1 |
uterus or analog | 1.10e-29 | 1 |
male accessory sex gland | 9.49e-16 | 2 |
sex gland | 9.49e-16 | 2 |
male reproductive gland | 9.49e-16 | 2 |
internal genitalia | 6.62e-14 | 9 |
cloaca | 4.56e-11 | 3 |
anal region | 4.56e-11 | 3 |
embryonic cloaca | 4.56e-11 | 3 |
terminal part of digestive tract | 4.56e-11 | 3 |
hindgut | 4.56e-11 | 3 |
primitive urogenital sinus | 4.56e-11 | 3 |
proctodeum | 4.56e-11 | 3 |
intermediate mesoderm | 1.96e-09 | 14 |
mesonephros | 1.46e-08 | 4 |
duct of male reproductive system | 1.46e-08 | 4 |
male genital duct | 1.46e-08 | 4 |
pronephros | 1.46e-08 | 4 |
internal male genitalia | 1.46e-08 | 4 |
nephrogenic cord | 1.46e-08 | 4 |
urogenital ridge | 1.46e-08 | 4 |
pronephric mesoderm | 1.46e-08 | 4 |
rostral part of nephrogenic cord | 1.46e-08 | 4 |
presumptive pronephric mesoderm | 1.46e-08 | 4 |
embryonic uterus | 1.73e-08 | 4 |
uterus | 1.73e-08 | 4 |
urinary system structure | 1.41e-07 | 18 |
renal system | 3.11e-07 | 19 |
orifice | 3.64e-07 | 5 |
genitourinary system | 3.64e-07 | 5 |
internal female genitalia | 4.77e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.