FFCP PHASE1:Mm9::chr7:4610585..4610628,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=243819|HGNC=|MCL_coexpression_id=452|UniProt=Q7TSI3|association_with_transcript=-33bp_to_ENSMUST00000064099,NM_172894,uc009eyb.1_5end|description=CAGE_peak_1_at_Ppp6r1_5end|id=chr7:4610585..4610628,-|ontology_enrichment_celltype=CL:0000988!4.40e-13!32;CL:0002032!4.40e-13!32;CL:0000037!4.40e-13!32;CL:0000566!4.40e-13!32;CL:0000837!4.40e-13!32;CL:0002320!8.23e-12!46;CL:0000134!8.23e-12!46;CL:0002031!2.15e-11!25;CL:0000063!2.68e-10!66;CL:0000219!1.00e-09!54;CL:0000049!2.03e-08!19;CL:0000738!1.75e-07!17;CL:0002087!1.75e-07!17;CL:0000763!3.13e-07!16|ontology_enrichment_celltype_v019_2=CL:0000988,4.40e-13,32;CL:0002032,4.40e-13,32;CL:0000037,4.40e-13,32;CL:0000837,4.40e-13,32;CL:0002320,8.23e-12,46;CL:0000134,8.23e-12,46;CL:0002031,2.15e-11,25;CL:0000219,1.00e-09,54;CL:0000049,2.03e-08,19;CL:0000738,1.75e-07,17;CL:0002087,1.75e-07,17;CL:0000763,3.13e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!6.83e-18!70;UBERON:0002193!1.35e-14!48;UBERON:0002390!2.61e-14!45;UBERON:0003061!2.61e-14!45;UBERON:0003929!1.77e-12!55;UBERON:0002384!8.23e-12!46;UBERON:0005057!2.57e-10!51;UBERON:0005911!1.14e-09!69;UBERON:0001007!4.49e-09!128;UBERON:0001555!4.49e-09!128;UBERON:0007026!4.49e-09!128;UBERON:0004119!7.01e-09!130;UBERON:0000925!7.01e-09!130;UBERON:0006595!7.01e-09!130;UBERON:0004921!1.49e-08!126;UBERON:0004185!1.49e-08!126;UBERON:0000490!1.61e-08!66;UBERON:0002371!2.27e-08!16;UBERON:0004177!2.46e-07!29;UBERON:0001474!4.45e-07!22;UBERON:0004765!4.45e-07!22;UBERON:0001434!4.45e-07!22;UBERON:0003408!9.98e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.35e-14,48;UBERON:0002405,1.35e-14,48;UBERON:0002390,2.61e-14,45;UBERON:0003061,2.61e-14,45;UBERON:0001007,4.80e-13,116;UBERON:0001555,4.80e-13,116;UBERON:0007026,4.80e-13,116;UBERON:0004119,9.18e-13,118;UBERON:0000925,9.18e-13,118;UBERON:0006595,9.18e-13,118;UBERON:0003929,1.77e-12,55;UBERON:0004921,2.03e-12,114;UBERON:0002384,8.23e-12,46;UBERON:0005911,1.14e-09,69;UBERON:0000490,1.61e-08,66;UBERON:0002371,2.27e-08,16;UBERON:0004177,2.46e-07,29;UBERON:0005057,2.46e-07,29;UBERON:0001474,4.45e-07,22;UBERON:0004765,4.45e-07,22;UBERON:0001434,4.45e-07,22;UBERON:0000160,5.88e-07,31;UBERON:0000077,6.03e-07,35;UBERON:0003408,9.98e-07,24|phase1_expression=32.8305136564828,138.892212240466,145.144757365262,185.10809731978,174.812609751275,71.1808112906413,59.8048359924546,121.117677388199,70.6759385201367,82.3907132653417,52.221480308779,56.0000556147262,109.568467155972,128.15830994625,57.9610985559253,65.8044619016934,67.8575021784302,77.7614237608056,82.2686601634433,89.9706061811824,37.759220827075,63.149044963763,60.0759515019551,56.9573025144528,65.3816451041435,118.866016571809,83.9985892510196,76.4922876034906,69.7385949404892,74.6009184089395,46.3416767269587,66.6782207132613,71.9625801473947,47.5445043046316,47.0828140194578,42.0573652756986,41.4463793212609,106.725565837911,64.0694982509516,86.9049414996505,107.058130821645,107.921186623434,107.783298372916,21.6542526917993,24.8373481487811,25.3294517983121,59.461742170451,45.5672576835133,29.8773208518882,40.2469891083767,32.8968090819602,50.3133975277401,88.0858681803116,103.726786307622,92.7618885633201,23.4106086792712,28.6533439938757,29.3933092598142,24.0756588422921,29.6234948392338,30.4239073682966,36.5952094634663,45.3540346016681,116.0870635293,118.663963508037,132.149301379975,77.8960287347852,89.9070834452438,27.996195323289,25.3811164063578,21.453146057841,35.4207220660716,30.9215957332259,21.435889862617,30.0954778997262,26.6573448116906,39.6417171597799,40.7322608491749,37.6336006477797,22.6844414895933,25.9824907830843,23.4411016750542,39.6439858581961,41.6444331423443,40.4915356608547,29.1682299618931,27.0506193518296,26.655120753018,29.8361201732745,30.5309102831413,55.3641173420205,46.4628893569949,42.1582226898805,51.8115063972304,47.4336784736798,51.9711189032909,47.8915472649274,17.724753548118,13.2490862347463,11.3068663843309,29.1545878937729,15.3991772897181,12.7402619853323,14.2213340630666,26.8448890853906,25.3359865475099,28.8148933658426,47.3863100834099,37.2870552451927,46.7592738054198,34.523580026461,38.0581847890177,40.1270965225542,34.8169299676558,33.7479589479473,41.8469749127819,43.7535092889842,35.1376437315385,97.3071607144862,37.0446086379567,52.7811229120341,58.1850303762267,87.6041277725174,46.2593659278244,45.8688287921467,77.9144018386204,80.1563182944607,68.3889113332485,73.7007317023775,41.3422164757311,54.4425717354165,27.5183031127173,44.4990259692228,54.2116769540301,39.687516510876,42.5072109237525,33.810668798305,51.5044858325785,38.9193047987859,37.2482084919059,30.31806321031,33.3358051428536,28.2697543794398,28.6339153887859,38.5086585196516,33.3095672740609,39.6358294887653,32.596624713116,42.8980305936356,39.5231707550742,39.0611495643966,33.3177513289914,26.4144886764318,36.9147296513497,28.3979348242962,31.6464484241404,70.2213187313235,69.9986307352025,77.8607988343924,42.6679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| ||
|EntrezGene=243819 | |||
|HGNC= | |||
|MCL_coexpression_id=452 | |||
|UniProt=Q7TSI3 | |||
|association_with_transcript=-33bp_to_ENSMUST00000064099,NM_172894,uc009eyb.1_5end | |||
|description=CAGE_peak_1_at_Ppp6r1_5end | |||
|id=chr7:4610585..4610628,- | |||
|ontology_enrichment_celltype=CL:0000988!4.40e-13!32;CL:0002032!4.40e-13!32;CL:0000037!4.40e-13!32;CL:0000566!4.40e-13!32;CL:0000837!4.40e-13!32;CL:0002320!8.23e-12!46;CL:0000134!8.23e-12!46;CL:0002031!2.15e-11!25;CL:0000063!2.68e-10!66;CL:0000219!1.00e-09!54;CL:0000049!2.03e-08!19;CL:0000738!1.75e-07!17;CL:0002087!1.75e-07!17;CL:0000763!3.13e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.40e-13,32;CL:0002032,4.40e-13,32;CL:0000037,4.40e-13,32;CL:0000837,4.40e-13,32;CL:0002320,8.23e-12,46;CL:0000134,8.23e-12,46;CL:0002031,2.15e-11,25;CL:0000219,1.00e-09,54;CL:0000049,2.03e-08,19;CL:0000738,1.75e-07,17;CL:0002087,1.75e-07,17;CL:0000763,3.13e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.83e-18!70;UBERON:0002193!1.35e-14!48;UBERON:0002390!2.61e-14!45;UBERON:0003061!2.61e-14!45;UBERON:0003929!1.77e-12!55;UBERON:0002384!8.23e-12!46;UBERON:0005057!2.57e-10!51;UBERON:0005911!1.14e-09!69;UBERON:0001007!4.49e-09!128;UBERON:0001555!4.49e-09!128;UBERON:0007026!4.49e-09!128;UBERON:0004119!7.01e-09!130;UBERON:0000925!7.01e-09!130;UBERON:0006595!7.01e-09!130;UBERON:0004921!1.49e-08!126;UBERON:0004185!1.49e-08!126;UBERON:0000490!1.61e-08!66;UBERON:0002371!2.27e-08!16;UBERON:0004177!2.46e-07!29;UBERON:0001474!4.45e-07!22;UBERON:0004765!4.45e-07!22;UBERON:0001434!4.45e-07!22;UBERON:0003408!9.98e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.35e-14,48;UBERON:0002405,1.35e-14,48;UBERON:0002390,2.61e-14,45;UBERON:0003061,2.61e-14,45;UBERON:0001007,4.80e-13,116;UBERON:0001555,4.80e-13,116;UBERON:0007026,4.80e-13,116;UBERON:0004119,9.18e-13,118;UBERON:0000925,9.18e-13,118;UBERON:0006595,9.18e-13,118;UBERON:0003929,1.77e-12,55;UBERON:0004921,2.03e-12,114;UBERON:0002384,8.23e-12,46;UBERON:0005911,1.14e-09,69;UBERON:0000490,1.61e-08,66;UBERON:0002371,2.27e-08,16;UBERON:0004177,2.46e-07,29;UBERON:0005057,2.46e-07,29;UBERON:0001474,4.45e-07,22;UBERON:0004765,4.45e-07,22;UBERON:0001434,4.45e-07,22;UBERON:0000160,5.88e-07,31;UBERON:0000077,6.03e-07,35;UBERON:0003408,9.98e-07,24 | |||
|phase1_expression=32.8305136564828,138.892212240466,145.144757365262,185.10809731978,174.812609751275,71.1808112906413,59.8048359924546,121.117677388199,70.6759385201367,82.3907132653417,52.221480308779,56.0000556147262,109.568467155972,128.15830994625,57.9610985559253,65.8044619016934,67.8575021784302,77.7614237608056,82.2686601634433,89.9706061811824,37.759220827075,63.149044963763,60.0759515019551,56.9573025144528,65.3816451041435,118.866016571809,83.9985892510196,76.4922876034906,69.7385949404892,74.6009184089395,46.3416767269587,66.6782207132613,71.9625801473947,47.5445043046316,47.0828140194578,42.0573652756986,41.4463793212609,106.725565837911,64.0694982509516,86.9049414996505,107.058130821645,107.921186623434,107.783298372916,21.6542526917993,24.8373481487811,25.3294517983121,59.461742170451,45.5672576835133,29.8773208518882,40.2469891083767,32.8968090819602,50.3133975277401,88.0858681803116,103.726786307622,92.7618885633201,23.4106086792712,28.6533439938757,29.3933092598142,24.0756588422921,29.6234948392338,30.4239073682966,36.5952094634663,45.3540346016681,116.0870635293,118.663963508037,132.149301379975,77.8960287347852,89.9070834452438,27.996195323289,25.3811164063578,21.453146057841,35.4207220660716,30.9215957332259,21.435889862617,30.0954778997262,26.6573448116906,39.6417171597799,40.7322608491749,37.6336006477797,22.6844414895933,25.9824907830843,23.4411016750542,39.6439858581961,41.6444331423443,40.4915356608547,29.1682299618931,27.0506193518296,26.655120753018,29.8361201732745,30.5309102831413,55.3641173420205,46.4628893569949,42.1582226898805,51.8115063972304,47.4336784736798,51.9711189032909,47.8915472649274,17.724753548118,13.2490862347463,11.3068663843309,29.1545878937729,15.3991772897181,12.7402619853323,14.2213340630666,26.8448890853906,25.3359865475099,28.8148933658426,47.3863100834099,37.2870552451927,46.7592738054198,34.523580026461,38.0581847890177,40.1270965225542,34.8169299676558,33.7479589479473,41.8469749127819,43.7535092889842,35.1376437315385,97.3071607144862,37.0446086379567,52.7811229120341,58.1850303762267,87.6041277725174,46.2593659278244,45.8688287921467,77.9144018386204,80.1563182944607,68.3889113332485,73.7007317023775,41.3422164757311,54.4425717354165,27.5183031127173,44.4990259692228,54.2116769540301,39.687516510876,42.5072109237525,33.810668798305,51.5044858325785,38.9193047987859,37.2482084919059,30.31806321031,33.3358051428536,28.2697543794398,28.6339153887859,38.5086585196516,33.3095672740609,39.6358294887653,32.596624713116,42.8980305936356,39.5231707550742,39.0611495643966,33.3177513289914,26.4144886764318,36.9147296513497,28.3979348242962,31.6464484241404,70.2213187313235,69.9986307352025,77.8607988343924,42.6679091423134,32.8336483973535,27.1893712806132,40.9568392562414,31.4822770795846,27.1510118681786,29.5318109833018,34.8755421819505,36.0804907914554,35.2158078814848,32.9976602798981,37.1295147720019,49.1231957749117,45.8859740958296,42.2750219095171,47.946108272621,25.7261530948211,98.4647973291718,73.5172575324653,34.5526965867079,35.0677374509262,37.242696322085,41.7484895970319,41.139938111301,46.7955040236896,78.2972951548444,41.8335344998988,43.7323263312469,47.9485097619174,45.2316682116359,79.9949273702257,56.6281690671699,69.5003043657742,27.881181440103,27.1911460011155,43.9560169125014,31.5659558160237,25.9896332804618,30.158402552837,33.7683108243534,35.5740456630841,42.5466552450126,45.0399648314572,53.3614728756868,51.7219827719892,55.8227546121497,57.5647007705226,56.5979738673923,68.4943133696864,61.874081982885,49.4837356415394,41.5066180544091,41.7333348045884,43.1304619582064,46.5176184585629,43.0611988898094,49.0003023217397,43.7729688993466,49.6916827004268,48.9595953941502,36.5718424717036,30.6374155711009,26.4802333809293,28.1628297946203,36.0138453499904,47.3706845363167,47.0272091337295,36.4137182885301,36.5416737920479,35.2395038733046,43.0960517702391,44.5527253214011,45.4198043945946,54.284862218138,83.7614753080813,36.3905562034087,39.183017975272,35.6422309772898,37.507739709505,21.4754778443445,40.647819279904,32.4973465998744,24.2072021463916,27.7896183075311,34.4115069051675,30.9690156974528,28.8738061404609,34.0040989406911,32.4404002281556,26.0889933444706,50.1261253618019,37.4721824949829,37.5718423737909,40.3959659196869,47.8413356620353,23.8941249011933,33.9892890616974,35.6741797218406,27.3477365646052,37.2080385029774,37.1996529012152,35.9215327503827,29.8097658171555,32.0847640546249,32.2357493094532,15.8127912862498,31.9720184069379,33.3630813638712,29.8901416091975,32.5983883132541,28.5068256592018,38.3054904667311,47.4461054821508,36.5298825736709,57.2394104335447,34.7314127934291,41.7309179601726,42.7825092226626,37.099406911833,35.1992450197074,29.9152107643653,39.392873521035,42.1842112344807,63.2513415486776,38.568462818186,65.2726764647797,40.2454392528284,36.1129328370938,67.8126445216888,60.00876596953,64.5154448442394,84.1393228469584,75.9936386117463,82.2289844136322,44.8695190467103,37.9603192297362,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| |||
|short_description=p1@Ppp6r1 | |||
}} |
Revision as of 13:28, 14 September 2013
Short description: | p1@Ppp6r1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppp6r1_5end |
Coexpression cluster: | MCL_coexpression_mm9:452 |
Association with transcript: | -33bp_to_ENSMUST00000064099, NM_172894, uc009eyb.1_5end |
EntrezGene: | Ppp6r1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.40e-13 | 32 |
hematopoietic oligopotent progenitor cell | 4.40e-13 | 32 |
hematopoietic stem cell | 4.40e-13 | 32 |
hematopoietic multipotent progenitor cell | 4.40e-13 | 32 |
connective tissue cell | 8.23e-12 | 46 |
mesenchymal cell | 8.23e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 2.15e-11 | 25 |
motile cell | 1.00e-09 | 54 |
common myeloid progenitor | 2.03e-08 | 19 |
leukocyte | 1.75e-07 | 17 |
nongranular leukocyte | 1.75e-07 | 17 |
myeloid cell | 3.13e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.35e-14 | 48 |
immune system | 1.35e-14 | 48 |
hematopoietic system | 2.61e-14 | 45 |
blood island | 2.61e-14 | 45 |
digestive system | 4.80e-13 | 116 |
digestive tract | 4.80e-13 | 116 |
primitive gut | 4.80e-13 | 116 |
endoderm-derived structure | 9.18e-13 | 118 |
endoderm | 9.18e-13 | 118 |
presumptive endoderm | 9.18e-13 | 118 |
gut epithelium | 1.77e-12 | 55 |
subdivision of digestive tract | 2.03e-12 | 114 |
connective tissue | 8.23e-12 | 46 |
endo-epithelium | 1.14e-09 | 69 |
unilaminar epithelium | 1.61e-08 | 66 |
bone marrow | 2.27e-08 | 16 |
hemopoietic organ | 2.46e-07 | 29 |
immune organ | 2.46e-07 | 29 |
bone element | 4.45e-07 | 22 |
skeletal element | 4.45e-07 | 22 |
skeletal system | 4.45e-07 | 22 |
intestine | 5.88e-07 | 31 |
mixed endoderm/mesoderm-derived structure | 6.03e-07 | 35 |
gland of gut | 9.98e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.