FFCP PHASE1:Mm9::chr7:4828714..4828729,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=664994|HGNC=|MCL_coexpression_id=8|UniProt=P85094,B2RY90|association_with_transcript=59bp_to_ENSMUST00000125249,NM_001101598,uc012ewz.1_5end|description=CAGE_peak_2_at_Isoc2a_5end|id=chr7:4828714..4828729,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.75e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.95e-07,25;UBERON:0002330,5.95e-07,25;UBERON:0002107,6.57e-07,22;UBERON:0007499,6.57e-07,22;UBERON:0006925,6.57e-07,22;UBERON:0009497,6.57e-07,22;UBERON:0000015,6.57e-07,22;UBERON:0002423,6.57e-07,22;UBERON:0006235,6.57e-07,22;UBERON:0008835,6.57e-07,22;UBERON:0003894,6.57e-07,22;UBERON:0004161,6.57e-07,22;UBERON:0008836,6.57e-07,22;UBERON:0009854,7.35e-07,23;UBERON:0009856,7.35e-07,23;UBERON:0000160,9.59e-07,31|phase1_expression=1.44133962394315,5.58360652222978,3.63999391511629,7.56160528267075,11.0197060588196,2.85394762250213,1.63528848416868,0.645616617207881,2.111830832275,0.70219357896598,0.856089841127525,0.478632953972018,1.71200729931206,1.04904482902797,1.99865857089398,1.21485160433896,0.699561878128147,1.57731082679119,1.50825876966313,1.27316895539409,6.71841992193451,1.09220046320974,1.30599894569468,1.75991665072747,1.60586496747019,5.16808767703518,6.46142994238612,5.17130958446134,2.28028103347649,4.53654233567875,1.10865255327652,0.635030673459631,0.61506478758457,0,6.35473563452804,3.49092755252834,5.71674197534634,2.51118978442145,1.5626706890476,1.57057123192139,2.35292595212406,0.683045484958446,3.88408282424923,0.503587271902309,0.304130793658544,1.46837401729345,7.04152209913235,5.45062890951116,4.61340983742391,5.05517737593137,4.05960622713551,7.18762821824858,2.51673909086605,1.45072428402269,2.35265659399725,2.31533492432352,4.87106847895886,2.06268836910977,0.809265843438391,0.528990979272033,1.90149421051854,1.69422266034566,3.55717918444456,10.3488467487361,10.8775299882367,9.2362414942993,7.78960287347852,19.5951335713993,0.725827286159344,0.675029691658453,0.630974884054146,3.14216082844184,2.42955395046775,0.122490799214954,0.670918297127655,0,4.40463523997555,3.06449611404451,3.07213066512487,0.263772575460388,0.731901148819277,1.04182674111352,3.35019598801657,3.93933827022176,3.51435969886663,2.06240009831567,0.854230084794618,0.559198337475902,1.36307147999731,1.13357340160178,1.44932244350839,12.0459342777394,10.1995700056163,36.6998170313716,22.0923981932207,32.2579358710082,3.08977724289854,0.340860645156116,1.81850203222008,2.82671659608272,1.26759077799012,0,2.54805239706646,0,0.216491041011214,0.506719730950197,1.01104889002957,8.79215873836762,1.8125651855302,1.1875371125186,1.56136794089522,1.21786191324856,2.07553947530453,1.80867168663147,0.470354828542819,3.76999773989026,0.247194967734374,7.37456720291549,0.884610551949874,0.970601099684455,2.65009822152472,0.969750506270444,1.86391761218122,2.63502717310392,1.67557365450764,2.04365644166873,2.99537811264801,2.39961092397363,3.43089613097275,0.748953197024114,0.915001205637253,0.251308704225729,1.21677024134594,0.511430914660661,1.0389402227978,0.162241263067758,1.42575109390443,1.61729061793121,1.76905930903572,3.57751155007006,0.130120442962704,0.459804208866946,0.540186389416048,0.753524089178575,0.816437989815934,0.640568601424249,0.655912071918102,1.03481348295606,0,0,0.175951124163949,0.657587197282725,0.834141747676794,1.0447564995665,0.823128545631774,0.995171334092466,2.1066395619397,3.3455227924913,3.40996199274711,0.621377317606506,0.703578179943289,1.2604344302271,0.946978942340841,0.393528463494808,1.07986979021165,1.86027155800326,1.60964040839772,3.15266424391358,1.6455984991348,1.14917224855367,2.51313309592153,3.65499968563331,3.51280184465681,4.96563749413376,0.630869845692382,0.308713837137853,4.62586296177317,3.96675849995316,0.639864751605702,0.464473343720877,1.54640953586512,3.02525286935014,5.33707305227689,3.04361001780095,7.11793592316767,1.31759163779209,3.77002813200404,2.38747766449381,3.8992817423824,3.59527763461689,3.45820879799511,4.77939055810481,0.379335801906163,0.799739588268102,2.25415471346161,1.83286195060783,0.775809948670503,1.75339549725796,2.90888070771584,15.3514553898786,10.9899109488962,14.3140710149289,11.5616524563988,1.00107063429656,0.393117990226406,0.449724224769707,1.01430060694251,1.4470629585145,4.32863948028414,5.75392274901621,11.3494658742525,7.13859674289012,12.9391385874619,9.67566463938109,17.1620720213008,15.1547326768267,17.4015491116255,15.9206362049911,1.10851914099963,0.568474235311454,0.977789858652155,0.509235257325564,1.64283173801951,0.837531287209079,1.6663054862021,1.95133647857799,1.26108115284953,1.10732344824387,1.11618338060241,2.62181303545181,2.76295970985433,3.03763023021174,10.5553898757491,5.4390568381871,2.45882136509518,1.93155722413313,1.12385412991454,1.17211686592203,0.655739781506702,6.31177318010932,0.94652465824877,1.17131623288992,0.430846795465598,0.955875191810208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| ||
|EntrezGene=664994 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=P85094,B2RY90 | |||
|association_with_transcript=59bp_to_ENSMUST00000125249,NM_001101598,uc012ewz.1_5end | |||
|description=CAGE_peak_2_at_Isoc2a_5end | |||
|id=chr7:4828714..4828729,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.75e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.95e-07,25;UBERON:0002330,5.95e-07,25;UBERON:0002107,6.57e-07,22;UBERON:0007499,6.57e-07,22;UBERON:0006925,6.57e-07,22;UBERON:0009497,6.57e-07,22;UBERON:0000015,6.57e-07,22;UBERON:0002423,6.57e-07,22;UBERON:0006235,6.57e-07,22;UBERON:0008835,6.57e-07,22;UBERON:0003894,6.57e-07,22;UBERON:0004161,6.57e-07,22;UBERON:0008836,6.57e-07,22;UBERON:0009854,7.35e-07,23;UBERON:0009856,7.35e-07,23;UBERON:0000160,9.59e-07,31 | |||
|phase1_expression=1.44133962394315,5.58360652222978,3.63999391511629,7.56160528267075,11.0197060588196,2.85394762250213,1.63528848416868,0.645616617207881,2.111830832275,0.70219357896598,0.856089841127525,0.478632953972018,1.71200729931206,1.04904482902797,1.99865857089398,1.21485160433896,0.699561878128147,1.57731082679119,1.50825876966313,1.27316895539409,6.71841992193451,1.09220046320974,1.30599894569468,1.75991665072747,1.60586496747019,5.16808767703518,6.46142994238612,5.17130958446134,2.28028103347649,4.53654233567875,1.10865255327652,0.635030673459631,0.61506478758457,0,6.35473563452804,3.49092755252834,5.71674197534634,2.51118978442145,1.5626706890476,1.57057123192139,2.35292595212406,0.683045484958446,3.88408282424923,0.503587271902309,0.304130793658544,1.46837401729345,7.04152209913235,5.45062890951116,4.61340983742391,5.05517737593137,4.05960622713551,7.18762821824858,2.51673909086605,1.45072428402269,2.35265659399725,2.31533492432352,4.87106847895886,2.06268836910977,0.809265843438391,0.528990979272033,1.90149421051854,1.69422266034566,3.55717918444456,10.3488467487361,10.8775299882367,9.2362414942993,7.78960287347852,19.5951335713993,0.725827286159344,0.675029691658453,0.630974884054146,3.14216082844184,2.42955395046775,0.122490799214954,0.670918297127655,0,4.40463523997555,3.06449611404451,3.07213066512487,0.263772575460388,0.731901148819277,1.04182674111352,3.35019598801657,3.93933827022176,3.51435969886663,2.06240009831567,0.854230084794618,0.559198337475902,1.36307147999731,1.13357340160178,1.44932244350839,12.0459342777394,10.1995700056163,36.6998170313716,22.0923981932207,32.2579358710082,3.08977724289854,0.340860645156116,1.81850203222008,2.82671659608272,1.26759077799012,0,2.54805239706646,0,0.216491041011214,0.506719730950197,1.01104889002957,8.79215873836762,1.8125651855302,1.1875371125186,1.56136794089522,1.21786191324856,2.07553947530453,1.80867168663147,0.470354828542819,3.76999773989026,0.247194967734374,7.37456720291549,0.884610551949874,0.970601099684455,2.65009822152472,0.969750506270444,1.86391761218122,2.63502717310392,1.67557365450764,2.04365644166873,2.99537811264801,2.39961092397363,3.43089613097275,0.748953197024114,0.915001205637253,0.251308704225729,1.21677024134594,0.511430914660661,1.0389402227978,0.162241263067758,1.42575109390443,1.61729061793121,1.76905930903572,3.57751155007006,0.130120442962704,0.459804208866946,0.540186389416048,0.753524089178575,0.816437989815934,0.640568601424249,0.655912071918102,1.03481348295606,0,0,0.175951124163949,0.657587197282725,0.834141747676794,1.0447564995665,0.823128545631774,0.995171334092466,2.1066395619397,3.3455227924913,3.40996199274711,0.621377317606506,0.703578179943289,1.2604344302271,0.946978942340841,0.393528463494808,1.07986979021165,1.86027155800326,1.60964040839772,3.15266424391358,1.6455984991348,1.14917224855367,2.51313309592153,3.65499968563331,3.51280184465681,4.96563749413376,0.630869845692382,0.308713837137853,4.62586296177317,3.96675849995316,0.639864751605702,0.464473343720877,1.54640953586512,3.02525286935014,5.33707305227689,3.04361001780095,7.11793592316767,1.31759163779209,3.77002813200404,2.38747766449381,3.8992817423824,3.59527763461689,3.45820879799511,4.77939055810481,0.379335801906163,0.799739588268102,2.25415471346161,1.83286195060783,0.775809948670503,1.75339549725796,2.90888070771584,15.3514553898786,10.9899109488962,14.3140710149289,11.5616524563988,1.00107063429656,0.393117990226406,0.449724224769707,1.01430060694251,1.4470629585145,4.32863948028414,5.75392274901621,11.3494658742525,7.13859674289012,12.9391385874619,9.67566463938109,17.1620720213008,15.1547326768267,17.4015491116255,15.9206362049911,1.10851914099963,0.568474235311454,0.977789858652155,0.509235257325564,1.64283173801951,0.837531287209079,1.6663054862021,1.95133647857799,1.26108115284953,1.10732344824387,1.11618338060241,2.62181303545181,2.76295970985433,3.03763023021174,10.5553898757491,5.4390568381871,2.45882136509518,1.93155722413313,1.12385412991454,1.17211686592203,0.655739781506702,6.31177318010932,0.94652465824877,1.17131623288992,0.430846795465598,0.955875191810208,1.55959071857676,1.98153571552183,1.61924280669958,0.876767573733936,1.97643888973262,1.28528526568723,1.56134093729095,1.42452482933804,0.651547837414304,2.47455184458803,1.32745138339963,0.485561272309963,0.604647113929502,3.01768127609437,2.06711325016541,3.3817866273832,2.58428293168221,3.27180356529755,3.20847640546249,4.74055136903724,3.16255825724996,3.09406629744561,3.06395645178409,0.540183282093931,0.517434735131018,0.428674070063185,1.06404140185364,0.891844088010353,1.15184314421485,1.522324745573,1.40803024838226,0.42366414172764,2.42581237860458,1.48397627647332,0.161464426695906,0.603129249281559,1.07435109602823,0.984845398470368,3.78925087618806,1.48340241608408,1.02522528478712,1.65109494370578,1.11116716421827,0.188368457004691,1.6403307326523,1.60144721244566,1.69978429993855,3.35883485576779,2.07299960706636,4.77335309007557,0.158167996790568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| |||
|short_description=p2@Isoc2a | |||
}} |
Revision as of 13:29, 14 September 2013
Short description: | p2@Isoc2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Isoc2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 59bp_to_ENSMUST00000125249, NM_001101598, uc012ewz.1_5end |
EntrezGene: | Isoc2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 5.95e-07 | 25 |
exocrine system | 5.95e-07 | 25 |
liver | 6.57e-07 | 22 |
epithelial sac | 6.57e-07 | 22 |
digestive gland | 6.57e-07 | 22 |
epithelium of foregut-midgut junction | 6.57e-07 | 22 |
anatomical boundary | 6.57e-07 | 22 |
hepatobiliary system | 6.57e-07 | 22 |
foregut-midgut junction | 6.57e-07 | 22 |
hepatic diverticulum | 6.57e-07 | 22 |
liver primordium | 6.57e-07 | 22 |
septum transversum | 6.57e-07 | 22 |
liver bud | 6.57e-07 | 22 |
digestive tract diverticulum | 7.35e-07 | 23 |
sac | 7.35e-07 | 23 |
intestine | 9.59e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.