FFCP PHASE1:Mm9::chr7:86983354..86983368,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=446|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:86983354..86983368,-|id=chr7:86983354..86983368,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000473,9.23e-12,7;CL:0000682,2.51e-10,3;CL:0000239,5.65e-09,6;CL:0000677,5.65e-09,6;CL:0000584,5.65e-09,6;CL:0002476,7.23e-08,2;CL:0000075,1.06e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.21e-21!43;UBERON:0005409!1.37e-17!59;UBERON:0004119!1.05e-09!130;UBERON:0000925!1.05e-09!130;UBERON:0006595!1.05e-09!130;UBERON:0000344!1.61e-09!15;UBERON:0001007!2.02e-09!128;UBERON:0001555!2.02e-09!128;UBERON:0007026!2.02e-09!128;UBERON:0004921!2.82e-08!126;UBERON:0004185!2.82e-08!126;UBERON:0002108!5.56e-08!16;UBERON:0001242!1.70e-07!13;UBERON:0000060!1.70e-07!13;UBERON:0001262!1.70e-07!13;UBERON:0004786!1.70e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.94e-25,31;UBERON:0000344,2.15e-20,15;UBERON:0005409,1.45e-15,47;UBERON:0001242,1.85e-15,13;UBERON:0001262,1.85e-15,13;UBERON:0004786,1.85e-15,13;UBERON:0002108,3.94e-14,4;UBERON:0004923,4.26e-12,24;UBERON:0000331,2.52e-11,3;UBERON:0002116,2.52e-11,3;UBERON:0001204,2.52e-11,3;UBERON:0001168,2.52e-11,3;UBERON:0001962,3.82e-07,2;UBERON:0001961,3.82e-07,2;UBERON:0001744,3.82e-07,2;UBERON:0001007,6.66e-07,116;UBERON:0001555,6.66e-07,116;UBERON:0007026,6.66e-07,116|phase1_expression=0,3.14077866875425,1.81999695755814,2.11724947914781,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,2.29692785646008,1.7230479846363,1.29282739611533,7.03086651988583,3.2763916868791,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,3.70230793328962,0,0,0,0.605050573870028,0.889512175379481,0.951128130562796,3.32170343081158,1.81168850196412,0.251335208800269,0.397912944082302,0.38992817423824,8.98819408654222,3.24207074812041,1.99141273254367,0,0,0,0,0.387904974335251,0.350679099451593,0,0,0,0.246794327843601,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,5.75072826109418,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,3.01582567878545,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0.302323556964751,0.754420319023592,0.295301892880773,0,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0.820704498725306,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0|short_description=p@chr7:86983354..86983368,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=446 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:86983354..86983368,- | |||
|id=chr7:86983354..86983368,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.23e-12,7;CL:0000682,2.51e-10,3;CL:0000239,5.65e-09,6;CL:0000677,5.65e-09,6;CL:0000584,5.65e-09,6;CL:0002476,7.23e-08,2;CL:0000075,1.06e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.21e-21!43;UBERON:0005409!1.37e-17!59;UBERON:0004119!1.05e-09!130;UBERON:0000925!1.05e-09!130;UBERON:0006595!1.05e-09!130;UBERON:0000344!1.61e-09!15;UBERON:0001007!2.02e-09!128;UBERON:0001555!2.02e-09!128;UBERON:0007026!2.02e-09!128;UBERON:0004921!2.82e-08!126;UBERON:0004185!2.82e-08!126;UBERON:0002108!5.56e-08!16;UBERON:0001242!1.70e-07!13;UBERON:0000060!1.70e-07!13;UBERON:0001262!1.70e-07!13;UBERON:0004786!1.70e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.94e-25,31;UBERON:0000344,2.15e-20,15;UBERON:0005409,1.45e-15,47;UBERON:0001242,1.85e-15,13;UBERON:0001262,1.85e-15,13;UBERON:0004786,1.85e-15,13;UBERON:0002108,3.94e-14,4;UBERON:0004923,4.26e-12,24;UBERON:0000331,2.52e-11,3;UBERON:0002116,2.52e-11,3;UBERON:0001204,2.52e-11,3;UBERON:0001168,2.52e-11,3;UBERON:0001962,3.82e-07,2;UBERON:0001961,3.82e-07,2;UBERON:0001744,3.82e-07,2;UBERON:0001007,6.66e-07,116;UBERON:0001555,6.66e-07,116;UBERON:0007026,6.66e-07,116 | |||
|phase1_expression=0,3.14077866875425,1.81999695755814,2.11724947914781,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,2.29692785646008,1.7230479846363,1.29282739611533,7.03086651988583,3.2763916868791,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,3.70230793328962,0,0,0,0.605050573870028,0.889512175379481,0.951128130562796,3.32170343081158,1.81168850196412,0.251335208800269,0.397912944082302,0.38992817423824,8.98819408654222,3.24207074812041,1.99141273254367,0,0,0,0,0.387904974335251,0.350679099451593,0,0,0,0.246794327843601,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,5.75072826109418,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,3.01582567878545,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0.302323556964751,0.754420319023592,0.295301892880773,0,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0.820704498725306,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr7:86983354..86983368,- | |||
}} |
Revision as of 14:17, 14 September 2013
Short description: | p@chr7:86983354..86983368, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:86983354..86983368, - |
Coexpression cluster: | MCL_coexpression_mm9:446 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.23e-12 | 7 |
M cell of gut | 2.51e-10 | 3 |
brush border epithelial cell | 5.65e-09 | 6 |
gut absorptive cell | 5.65e-09 | 6 |
enterocyte | 5.65e-09 | 6 |
bone marrow macrophage | 7.23e-08 | 2 |
columnar/cuboidal epithelial cell | 1.06e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.94e-25 | 31 |
mucosa | 2.15e-20 | 15 |
gastrointestinal system | 1.45e-15 | 47 |
intestinal mucosa | 1.85e-15 | 13 |
wall of intestine | 1.85e-15 | 13 |
gastrointestinal system mucosa | 1.85e-15 | 13 |
small intestine | 3.94e-14 | 4 |
organ component layer | 4.26e-12 | 24 |
ileal mucosa | 2.52e-11 | 3 |
ileum | 2.52e-11 | 3 |
mucosa of small intestine | 2.52e-11 | 3 |
wall of small intestine | 2.52e-11 | 3 |
gut-associated lymphoid tissue | 3.82e-07 | 2 |
mucosa-associated lymphoid tissue | 3.82e-07 | 2 |
lymphoid tissue | 3.82e-07 | 2 |
digestive system | 6.66e-07 | 116 |
digestive tract | 6.66e-07 | 116 |
primitive gut | 6.66e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.