FFCP PHASE1:Mm9::chr9:113702146..113702187,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=76499|HGNC=|MCL_coexpression_id=146|UniProt=Q8BRT1|association_with_transcript=-256bp_to_uc009rws.1,uc009rwt.1_5end|description=CAGE_peak_10_at_Clasp2_5end|id=chr9:113702146..113702187,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.48e-19!71;UBERON:0003075!6.48e-19!71;UBERON:0007284!6.48e-19!71;UBERON:0002616!5.12e-18!49;UBERON:0000955!1.69e-17!50;UBERON:0006238!1.69e-17!50;UBERON:0001049!1.15e-16!52;UBERON:0005068!1.15e-16!52;UBERON:0006241!1.15e-16!52;UBERON:0007135!1.15e-16!52;UBERON:0000033!5.10e-16!63;UBERON:0003056!1.33e-14!49;UBERON:0003080!1.60e-14!40;UBERON:0001017!7.76e-14!73;UBERON:0005743!7.76e-14!73;UBERON:0002780!2.38e-13!39;UBERON:0001890!2.38e-13!39;UBERON:0006240!2.38e-13!39;UBERON:0000073!3.09e-13!75;UBERON:0001016!3.09e-13!75;UBERON:0004121!5.67e-13!102;UBERON:0000924!5.67e-13!102;UBERON:0006601!5.67e-13!102;UBERON:0002298!4.63e-11!6;UBERON:0002791!4.74e-11!29;UBERON:0003528!4.74e-11!29;UBERON:0001893!4.74e-11!29;UBERON:0002020!5.82e-10!34;UBERON:0007811!1.62e-09!86;UBERON:0000153!4.86e-08!94;UBERON:0002950!7.27e-08!4;UBERON:0001891!7.27e-08!4;UBERON:0009616!7.27e-08!4;UBERON:0000956!2.07e-07!21;UBERON:0001869!2.07e-07!21;UBERON:0000203!2.07e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.34e-10,10;UBERON:0000411,9.34e-10,10;UBERON:0001950,9.34e-10,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.244981598429908,0.383381884072945,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.763991238884051,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,6.67989625791711,0,0,0,0,0.705532242814229,0.376999773989026,0,0,0,0,0,0.484875253135222,0,0,1.04723353406728,0,0,0,0,0.599162557619291,0,0.251308704225729,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0,0,0,0.452114453507145,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,1.5107877947794,0,0,2.26571204492102,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0|short_description=p10@Clasp2}} | ||
|EntrezGene=76499 | |||
|HGNC= | |||
|MCL_coexpression_id=146 | |||
|UniProt=Q8BRT1 | |||
|association_with_transcript=-256bp_to_uc009rws.1,uc009rwt.1_5end | |||
|description=CAGE_peak_10_at_Clasp2_5end | |||
|id=chr9:113702146..113702187,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.48e-19!71;UBERON:0003075!6.48e-19!71;UBERON:0007284!6.48e-19!71;UBERON:0002616!5.12e-18!49;UBERON:0000955!1.69e-17!50;UBERON:0006238!1.69e-17!50;UBERON:0001049!1.15e-16!52;UBERON:0005068!1.15e-16!52;UBERON:0006241!1.15e-16!52;UBERON:0007135!1.15e-16!52;UBERON:0000033!5.10e-16!63;UBERON:0003056!1.33e-14!49;UBERON:0003080!1.60e-14!40;UBERON:0001017!7.76e-14!73;UBERON:0005743!7.76e-14!73;UBERON:0002780!2.38e-13!39;UBERON:0001890!2.38e-13!39;UBERON:0006240!2.38e-13!39;UBERON:0000073!3.09e-13!75;UBERON:0001016!3.09e-13!75;UBERON:0004121!5.67e-13!102;UBERON:0000924!5.67e-13!102;UBERON:0006601!5.67e-13!102;UBERON:0002298!4.63e-11!6;UBERON:0002791!4.74e-11!29;UBERON:0003528!4.74e-11!29;UBERON:0001893!4.74e-11!29;UBERON:0002020!5.82e-10!34;UBERON:0007811!1.62e-09!86;UBERON:0000153!4.86e-08!94;UBERON:0002950!7.27e-08!4;UBERON:0001891!7.27e-08!4;UBERON:0009616!7.27e-08!4;UBERON:0000956!2.07e-07!21;UBERON:0001869!2.07e-07!21;UBERON:0000203!2.07e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.34e-10,10;UBERON:0000411,9.34e-10,10;UBERON:0001950,9.34e-10,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.244981598429908,0.383381884072945,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.763991238884051,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,6.67989625791711,0,0,0,0,0.705532242814229,0.376999773989026,0,0,0,0,0,0.484875253135222,0,0,1.04723353406728,0,0,0,0,0.599162557619291,0,0.251308704225729,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0,0,0,0.452114453507145,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,1.5107877947794,0,0,2.26571204492102,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p10@Clasp2 | |||
}} |
Revision as of 17:03, 14 September 2013
Short description: | p10@Clasp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Clasp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:146 |
Association with transcript: | -256bp_to_uc009rws.1, uc009rwt.1_5end |
EntrezGene: | Clasp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 9.34e-10 | 10 |
visual cortex | 9.34e-10 | 10 |
neocortex | 9.34e-10 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.