FFCP PHASE1:Hg19::chr1:9610095..9610099,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:9610095..9610099,+ | |||
|id=chr1:9610095..9610099,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.89e-10!172;CL:0000566!1.89e-10!172;CL:0000738!1.21e-09!140;CL:0002087!1.58e-09!119;CL:0002032!3.14e-09!165;CL:0000837!3.14e-09!165;CL:0000988!3.72e-09!182;CL:0002031!1.09e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000623;8.81e-12;3!CL:0002127;3.00e-09;1!CL:0000911;3.00e-09;1!CL:0000814;3.00e-09;1!CL:0000791;3.25e-07;18!CL:0000789;3.25e-07;18!CL:0002419;3.25e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,6.73e-12,3;CL:0000825,6.73e-12,3;CL:0000838,3.79e-11,52;CL:0000542,6.51e-11,53;CL:0000051,6.51e-11,53;CL:0002127,2.77e-09,1;CL:0000914,2.77e-09,1;CL:0000911,2.77e-09,1;CL:0000814,2.77e-09,1;CL:0002042,2.77e-09,1;CL:0002039,2.77e-09,1;CL:0002040,2.77e-09,1;CL:0002041,2.77e-09,1;CL:0002087,8.23e-08,115;CL:0000738,1.46e-07,136;CL:0002031,2.10e-07,120;CL:0000791,3.48e-07,18;CL:0000789,3.48e-07,18;CL:0002420,3.48e-07,18;CL:0002419,3.48e-07,18;CL:0000790,3.48e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;3.25e-07;18 | |||
|ontology_enrichment_disease=DOID:162!1.09e-13!235;DOID:14566!1.38e-13!239;DOID:0050687!9.05e-12!143;DOID:305!1.38e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:171;1.15e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.38e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;3.00e-09;1!UBERON:0009661;3.00e-09;1!UBERON:0002950;3.00e-09;1!UBERON:0001891;3.00e-09;1!UBERON:0002346;7.57e-09;4!UBERON:0000923;7.57e-09;4!UBERON:0010316;7.57e-09;4!UBERON:0005291;7.57e-09;4!UBERON:0002050;3.03e-07;5!UBERON:0005423;3.03e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,5.72e-09,1;UBERON:0009661,5.72e-09,1;UBERON:0002950,5.72e-09,1;UBERON:0001891,5.72e-09,1;UBERON:0009616,5.72e-09,1;UBERON:0010286,5.72e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.246301768349837,0.472264687882075,0.786728553697808,0,0.464448369948228,0,0,0,0.46480320348181,1.27952309238679,0,0,0.802177789880567,1.08505435357926,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0,0.411167888021826,0.619412741790207,0.575384784644301,0,0,0.344745680736619,0,1.35426486594342,0.376484679085209,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.632924774881769,0.422510572623884,0,0.419317291016752,0.561643155732475,0.150176892841506,0.964353520182481,0.855038231223746,1.59133341759272,0.730656615058536,0,0,0,0,0,0,0,0,0.569212969109448,2.34894875748376,2.6759125968766,0,0,0.263384084775077,0.590129310341499,1.57204305099666,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.80642697289893,1.33720097891754,1.15859523106239,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0.882926198829301,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0.492434012174795,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.576479813667846,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45710687191585,0.591092280605782,1.94064817373566,2.31017465303547,0,0,0,0,0,0,2.99161459204025,0,0,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.213455115606889,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0.241718899183244,0,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0.145016693914229,0.255679882248303,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0.144269212976445,0.355709216742071,0,0.199579371432817,0.191505370132367,0.423347165447766,0.324621940274555,0.561594356226918,0.456469358066384,0.156679895773023,0,0,0.321176150207399,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0.242721043499027,0.222886768554957,0.284136146806413,0.23874448473769,0,0,0,0.281338832821026,0,0.16480387422676,2.95575571379191,0.398495976502139,0,0.755798243562828,0.20453736500431,0.984678443688556,0,0.179736702294654,0.537063524026827,0,0,0,0,0,0.278304294485554,0,0.260427761085233,0.262379999988587,0,0.341380344856499,0,0.236387681767936,0.344743373241465,0.874813840149763,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0.32681539055697,0,0.0769502585037971,0.455768223388005,0.46112780877612,0.179515288819544,0,0,0,0,0,0.941881538370149,0.498635045700469,0.225595660617181,0,0.503464760927528,0.569261198172555,0,0.210998064528027,0.163232808159148,0.424059214301822,0.216388639742091,0.995261931078505,0,0.611030144933625,0.296521128680622,0,0.104421949505455,0.202203398942031,0,0,0.547364367646998,0.391329237864179,0.485560759068186,0.789168805698781,1.20990716048664,0,0.126373159256976,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0.293977192243133,0.261177619741208,0,0,0.677294319023596,0.146178634172371,0.492692742319255,0,0,0,0.274083849293502,0,0.253243183823515,0.782205530939212,0.400794101257669,0,0,0,0.114536596165916,0.514784993585894,0,0.372757606696298,0,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0.262887354279314,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,2.32991899054908,0.236349546921671,0.329663433524666,0.337017719270924,0.196854963029498,0.592713324460491,0.795229689809303,0.817220436669454,0.160753148465019,0,0,0,0,0.182248669974074,0.335434687599266,0.236417121897595,0.104909176269996,0.211200673038813,0.35857467866569,0.383830394638891,0,0,0.76280561296425,0,0,0,0,0.492555124496034,0,0,0.146552233678082,0,0.258565912723101,0.66116300871345,0.171086837884329,0,0.106787412567695,0,0.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| |||
|short_description=p@chr1:9610095..9610099,+ | |||
}} |
Revision as of 16:13, 10 January 2014
Short description: | p@chr1:9610095..9610099, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:9610095..9610099, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 6.73e-12 | 3 |
pro-NK cell | 6.73e-12 | 3 |
lymphoid lineage restricted progenitor cell | 3.79e-11 | 52 |
lymphocyte | 6.51e-11 | 53 |
common lymphoid progenitor | 6.51e-11 | 53 |
innate effector T cell | 2.77e-09 | 1 |
immature NK T cell | 2.77e-09 | 1 |
effector T cell | 2.77e-09 | 1 |
mature NK T cell | 2.77e-09 | 1 |
immature NK T cell stage IV | 2.77e-09 | 1 |
immature NK T cell stage I | 2.77e-09 | 1 |
immature NK T cell stage II | 2.77e-09 | 1 |
immature NK T cell stage III | 2.77e-09 | 1 |
nongranular leukocyte | 8.23e-08 | 115 |
leukocyte | 1.46e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 2.10e-07 | 120 |
mature alpha-beta T cell | 3.48e-07 | 18 |
alpha-beta T cell | 3.48e-07 | 18 |
immature T cell | 3.48e-07 | 18 |
mature T cell | 3.48e-07 | 18 |
immature alpha-beta T cell | 3.48e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 5.72e-09 | 1 |
midbrain nucleus | 5.72e-09 | 1 |
regional part of midbrain | 5.72e-09 | 1 |
midbrain | 5.72e-09 | 1 |
presumptive midbrain | 5.72e-09 | 1 |
midbrain neural tube | 5.72e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.38e-08 | 10 |