FFCP PHASE1:Hg19::chr1:19252656..19252668,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C694 | |||
|description=CAGE_peak_at_chr1:19252656..19252668,- | |||
|id=chr1:19252656..19252668,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.49e-18;3!CL:0002393;4.18e-15;6!CL:0002397;4.18e-15;6!CL:0000791;8.99e-11;18!CL:0000789;8.99e-11;18!CL:0002419;8.99e-11;18!CL:0000624;5.79e-09;6!CL:0000084;1.39e-07;25!CL:0000542;9.82e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.13e-18,3;CL:0000825,3.13e-18,3;CL:0002031,4.92e-11,120;CL:0000838,5.24e-11,52;CL:0000791,8.56e-11,18;CL:0000789,8.56e-11,18;CL:0002420,8.56e-11,18;CL:0002419,8.56e-11,18;CL:0000790,8.56e-11,18;CL:0000542,9.28e-11,53;CL:0000051,9.28e-11,53;CL:0000738,1.52e-10,136;CL:0002087,3.43e-10,115;CL:0002393,5.27e-10,9;CL:0002397,5.27e-10,9;CL:0000624,5.43e-09,6;CL:0000037,8.75e-08,168;CL:0000084,1.34e-07,25;CL:0000827,1.34e-07,25;CL:0002032,2.79e-07,161;CL:0000837,2.79e-07,161;CL:0000988,3.43e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;8.99e-11;18!CL:0000051;9.82e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.82e-10!57;UBERON:0005068!3.82e-10!57;UBERON:0006241!3.82e-10!57;UBERON:0007135!3.82e-10!57;UBERON:0003075!6.38e-08!86;UBERON:0007284!6.38e-08!86;UBERON:0002346!6.84e-08!90;UBERON:0000955!7.54e-08!69;UBERON:0006238!7.54e-08!69;UBERON:0002616!1.10e-07!59;UBERON:0005743!2.19e-07!86;UBERON:0001017!2.41e-07!82;UBERON:0003080!4.60e-07!42;UBERON:0000033!5.15e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.753255837568817,0,0,0.0787107813136792,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0.293600439334847,2.21598163412751,2.00544447470142,2.60413044859022,0,0,0,0,0.377875943688809,0,0.464858073811369,0,0,0,0.512321413058201,0,0,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0.368277635987565,0.316462387440884,0.422510572623884,1.06302149982522,0,0.22465726229299,0.300353785683013,1.76798145366788,0,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,1.70763890732835,0.587237189370939,1.14681968437569,0,1.12101712596307,0,4.13090517239049,2.35806457649499,1.43921049299656,0,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,0.541607727530031,0,0.260118695119756,0.822189523018381,0,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0,0.34362744548263,1.01207876807801,0,0.651083453856419,0,0.150575119077773,0,0,0,0,4.03213486449465,2.94184215361858,2.31719046212478,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0,0,1.07633781413317,0.213557388818567,0.211931901159562,0.900273288253207,0.206105058476878,0,0,0.675105328965065,0.194874010322397,1.26216887122057,0.0920498986422993,0,1.42003837006646,0,0.67824236924195,0,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0.804231779293047,0.277765335475589,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.567100388969546,0.268675568108545,0,0.383382679165211,0.492663237895943,0.44024217006613,1.65862492432618,0,0.12624243342638,0.126995788584338,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0.336255431980582,4.13764596424047,6.90008239550455,4.87703537863044,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,1.44737618286021,0.647142602455851,0.533637789017222,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0.322260734604821,0.290033387828457,0.0852266274161009,0,0.330569830721956,0,1.53135254993501,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.142283686696828,0,0.59873811429845,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0,0.71623345421307,0,0.614321404198464,0,0,0.222617410045812,0.494411622680279,2.32237948940793,0.597743964753209,0,0,0.818149460017238,0.123084805461069,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,1.99042667876204,0.295547618953547,0,0,1.11538995422883,0.153900517007594,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.104421949505455,0.539209063845416,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0,0,0.587954384486266,0.870592065804026,0,0.171986032471617,0.0967563312890851,0,0,0.193978032976839,0,0.225980740780532,0.411125773940253,0.19871461170299,0.443175571691151,0.195551382734803,0,0,0.19980960958213,0.288180834308212,0,0,0,0.621262677827163,0.942776138467182,0,0.209205692624666,0.203996435272644,1.44475294950759,0,0.547621515567972,0,0,0.525774708558629,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0.268733889946905,0,0,0.0787831823072236,0,0.0674035438541849,0.590564889088493,0.169346664131569,0,0.272406812223151,0,0,0.415440338029185,0,8.51182150013745,0.242998226632099,0,0.0788057072991982,0.262272940674991,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0.26446520348538,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0.992332043623902,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0.573409195690071,0.776503360757966,0.372578417648301,0,0.124980407962107,0,0.285465333544967,0,0,0,0,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| |||
|short_description=p@chr1:19252656..19252668,- | |||
}} |
Revision as of 16:42, 10 January 2014
Short description: | p@chr1:19252656..19252668, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:19252656..19252668, - |
Coexpression cluster: | C694_immature_Natural_CD8_CD14_Eosinophils_Basophils_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.13e-18 | 3 |
pro-NK cell | 3.13e-18 | 3 |
hematopoietic lineage restricted progenitor cell | 4.92e-11 | 120 |
lymphoid lineage restricted progenitor cell | 5.24e-11 | 52 |
mature alpha-beta T cell | 8.56e-11 | 18 |
alpha-beta T cell | 8.56e-11 | 18 |
immature T cell | 8.56e-11 | 18 |
mature T cell | 8.56e-11 | 18 |
immature alpha-beta T cell | 8.56e-11 | 18 |
lymphocyte | 9.28e-11 | 53 |
common lymphoid progenitor | 9.28e-11 | 53 |
leukocyte | 1.52e-10 | 136 |
nongranular leukocyte | 3.43e-10 | 115 |
intermediate monocyte | 5.27e-10 | 9 |
CD14-positive, CD16-positive monocyte | 5.27e-10 | 9 |
CD4-positive, alpha-beta T cell | 5.43e-09 | 6 |
hematopoietic stem cell | 8.75e-08 | 168 |
T cell | 1.34e-07 | 25 |
pro-T cell | 1.34e-07 | 25 |
hematopoietic oligopotent progenitor cell | 2.79e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.79e-07 | 161 |
hematopoietic cell | 3.43e-07 | 177 |