FFCP PHASE1:Hg19::chr1:42619070..42619088,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2981 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4683 | |||
|TSSclassifier=strong | |||
|UniProt=Q16661 | |||
|association_with_transcript=-3bp_to_ENST00000372581,NM_007102,uc001chc.1_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_GUCA2B_5end | |||
|id=chr1:42619070..42619088,+ | |||
|ontology_enrichment_celltype=CL:0000313!3.33e-08!1;CL:0002563!8.83e-08!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.28e-19;1 | |||
|ontology_enrichment_disease=DOID:2152!3.33e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.55e-26!35;UBERON:0000160!9.62e-24!27;UBERON:0001155!9.39e-20!9;UBERON:0000059!3.91e-16!11;UBERON:0004921!7.87e-14!129;UBERON:0004185!7.87e-14!129;UBERON:0001007!2.03e-12!155;UBERON:0001555!2.03e-12!155;UBERON:0007026!2.03e-12!155;UBERON:0004119!4.34e-11!169;UBERON:0000925!4.34e-11!169;UBERON:0006595!4.34e-11!169;UBERON:0004177!4.33e-09!7;UBERON:0005057!6.48e-09!26;UBERON:0003929!7.36e-09!54;UBERON:0001154!1.88e-08!1;UBERON:0001153!1.88e-08!1;UBERON:0004911!3.33e-08!1;UBERON:0002108!7.62e-08!14;UBERON:0001242!8.83e-08!4;UBERON:0001262!8.83e-08!4;UBERON:0004786!8.83e-08!4;UBERON:0004808!8.83e-08!4;UBERON:0001277!8.83e-08!4;UBERON:0002370!1.33e-07!4;UBERON:0005058!1.33e-07!4;UBERON:0009113!1.33e-07!4;UBERON:0003295!1.33e-07!4;UBERON:0005562!1.33e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.24e-49;17!UBERON:0005409;3.44e-38;22!UBERON:0002108;3.27e-33;4!UBERON:0001155;1.68e-32;9!UBERON:0000059;1.09e-26;11!UBERON:0004921;2.76e-23;33!UBERON:0001154;4.28e-19;1!UBERON:0001153;4.28e-19;1!UBERON:0009854;4.28e-19;1!UBERON:0001007;6.73e-10;81!UBERON:0001555;1.03e-09;54!UBERON:0002114;2.71e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.85e-49,17;UBERON:0005409,9.44e-34,25;UBERON:0002108,3.46e-33,4;UBERON:0001155,1.75e-32,9;UBERON:0000059,1.13e-26,11;UBERON:0001154,4.69e-19,1;UBERON:0001153,4.69e-19,1;UBERON:0001045,4.69e-19,1;UBERON:0004921,9.58e-12,118;UBERON:0001007,1.87e-09,145;UBERON:0001555,1.87e-09,145;UBERON:0007026,1.87e-09,145;UBERON:0004119,1.64e-08,160;UBERON:0000925,1.64e-08,160;UBERON:0006595,1.64e-08,160;UBERON:0009854,1.30e-07,23;UBERON:0011216,2.76e-07,223;UBERON:0002114,2.79e-07,2;UBERON:0009856,8.54e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21027132424918,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,20.9005005526486,102.080029436853,6.11030144933625,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,161.911383710468,5.68254857310289,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@GUCA2B | |||
}} |
Revision as of 18:08, 10 January 2014
Short description: | p1@GUCA2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GUCA2B_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -3bp_to_ENST00000372581, NM_007102, uc001chc.1_5end |
EntrezGene: | GUCA2B |
HGNC: | 4683 |
UniProt: | Q16661 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 8.85e-49 | 17 |
gastrointestinal system | 9.44e-34 | 25 |
small intestine | 3.46e-33 | 4 |
colon | 1.75e-32 | 9 |
large intestine | 1.13e-26 | 11 |
vermiform appendix | 4.69e-19 | 1 |
caecum | 4.69e-19 | 1 |
midgut | 4.69e-19 | 1 |
subdivision of digestive tract | 9.58e-12 | 118 |
digestive system | 1.87e-09 | 145 |
digestive tract | 1.87e-09 | 145 |
primitive gut | 1.87e-09 | 145 |
endoderm-derived structure | 1.64e-08 | 160 |
endoderm | 1.64e-08 | 160 |
presumptive endoderm | 1.64e-08 | 160 |
digestive tract diverticulum | 1.30e-07 | 23 |
organ system subdivision | 2.76e-07 | 223 |
duodenum | 2.79e-07 | 2 |
sac | 8.54e-07 | 26 |