FFCP PHASE1:Hg19::chr1:119532127..119532138,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11594 | |||
|TSSclassifier=strong | |||
|UniProt=Q96SF7,E9PCG3,Q8N8P2 | |||
|association_with_transcript=40bp_to_ENST00000207157,ENST00000344218,NM_152380,uc001ehl.1_5end | |||
|description=CAGE_peak_5_at_TBX15_5end | |||
|id=chr1:119532127..119532138,- | |||
|ontology_enrichment_celltype=CL:0002620!9.45e-23!23;CL:0000055!8.59e-16!180;CL:0000057!3.61e-14!75;CL:0000188!1.49e-12!9;CL:0000136!2.90e-11!15;CL:0000327!1.57e-10!14;CL:0000153!2.16e-10!9;CL:0000447!2.16e-10!9;CL:0000499!2.38e-09!27;CL:0000667!4.62e-09!6;CL:0000058!4.62e-09!6;CL:0000138!4.62e-09!6;CL:0002551!5.40e-07!6;CL:0002580!6.08e-07!3;CL:0002573!6.32e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.53e-15;6!CL:0000327;4.34e-13;15!CL:0002617;4.61e-12;2!CL:0002620;4.80e-11;23!CL:0000153;2.11e-10;9!CL:0000447;2.11e-10;9!CL:0002573;1.30e-08;2!CL:0000708;2.50e-08;3!CL:0000136;5.65e-07;13!CL:0000499;9.67e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.86e-15,6;CL:0000138,1.86e-15,6;CL:0000327,3.59e-13,15;CL:0002617,5.49e-12,2;CL:0002620,3.40e-11,23;CL:0000153,2.40e-10,9;CL:0000447,2.40e-10,9;CL:0000136,7.77e-09,15;CL:0002573,9.08e-09,2;CL:0000708,1.49e-08,3;CL:0000499,8.80e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.65e-07;1 | |||
|ontology_enrichment_disease=DOID:17!8.66e-11!5;DOID:450!8.66e-11!5;DOID:66!8.66e-11!5;DOID:423!8.66e-11!5;DOID:0080000!8.66e-11!5;DOID:11722!8.66e-11!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.83e-18;5!DOID:450;2.83e-18;5!DOID:66;2.83e-18;5!DOID:423;2.83e-18;5!DOID:0080000;2.83e-18;5!DOID:11722;2.83e-18;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.71e-18,5;DOID:450,1.71e-18,5;DOID:66,1.71e-18,5;DOID:423,1.71e-18,5;DOID:0080000,1.71e-18,5;DOID:11722,1.71e-18,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.37e-16!40;UBERON:0002199!4.32e-15!45;UBERON:0002416!4.32e-15!45;UBERON:0003102!4.35e-08!95;UBERON:0000310!5.50e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.02e-10;41!UBERON:0003210;2.50e-08;3!UBERON:0003102;9.82e-08;50!UBERON:0002199;1.04e-07;46!UBERON:0002416;1.04e-07;46!UBERON:0002363;2.65e-07;1!UBERON:0007029;7.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.01e-12,41;UBERON:0002199,1.60e-10,46;UBERON:0002416,1.60e-10,46;UBERON:0003210,1.49e-08,3;UBERON:0002363,3.17e-07,1;UBERON:0007645,3.17e-07,1;UBERON:0007647,3.17e-07,1;UBERON:0010115,3.17e-07,1;UBERON:0007029,5.69e-07,1 | |||
|phase1_expression=1.09007027562334,1.2846031433459,0,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.50401373190767,1.01392563272577,2.3858578411533,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0.24666754841716,0,0,0,0.605429710579726,1.15235184896,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0.421352420106746,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,1.97328599257748,1.06778694409284,0.423863802319124,2.40072876867522,1.54578793857658,0.515281080091258,0,0.337552664482532,0.584622030967192,1.26216887122057,1.56484827691909,0,1.42003837006646,0.806016785821122,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,2.76269842704961,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,1.34557301214433,0,1.98013371716565,0,3.57656445851882,0.845302752556,0,0,1.02882949704857,0,0.532844358032199,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0.958499421966331,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,1.99267679560631,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0,0.992431231275107,2.91577749247319,0.561320188866147,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06337790121334,0.462145851343933,1.07452572308291,0.137836572484531,1.07420244868274,0.725083469571143,0.426133137080504,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27471686662557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,1.2534494701135,0.306345576763462,0.655745261419609,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77498001095848,2.38597533325642,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0.101988829741982,0,0,0,0,0,0.829169439458779,0,0.639701945702943,0.23806443146374,0,0,0,0,0,0.653150243690884,1.02669990325584,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@TBX15 | |||
}} |
Revision as of 20:24, 10 January 2014
Short description: | p5@TBX15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TBX15_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000207157, ENST00000344218, NM_152380, uc001ehl.1_5end |
EntrezGene: | TBX15 |
HGNC: | 11594 |
UniProt: | Q96SF7E9PCG3Q8N8P2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.86e-15 | 6 |
chondrocyte | 1.86e-15 | 6 |
extracellular matrix secreting cell | 3.59e-13 | 15 |
adipocyte of breast | 5.49e-12 | 2 |
skin fibroblast | 3.40e-11 | 23 |
GAG secreting cell | 2.40e-10 | 9 |
carbohydrate secreting cell | 2.40e-10 | 9 |
fat cell | 7.77e-09 | 15 |
Schwann cell | 9.08e-09 | 2 |
leptomeningeal cell | 1.49e-08 | 3 |
stromal cell | 8.80e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.01e-12 | 41 |
integument | 1.60e-10 | 46 |
integumental system | 1.60e-10 | 46 |
blood-cerebrospinal fluid barrier | 1.49e-08 | 3 |
dura mater | 3.17e-07 | 1 |
future meninx | 3.17e-07 | 1 |
ectomeninx | 3.17e-07 | 1 |
future dura mater | 3.17e-07 | 1 |
surface | 5.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.71e-18 | 5 |
myotonic disease | 1.71e-18 | 5 |
muscle tissue disease | 1.71e-18 | 5 |
myopathy | 1.71e-18 | 5 |
muscular disease | 1.71e-18 | 5 |
myotonic dystrophy | 1.71e-18 | 5 |