FFCP PHASE1:Hg19::chr1:120254548..120254571,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8923 | |||
|TSSclassifier=strong | |||
|UniProt=F5H634 | |||
|association_with_transcript=0bp_to_ENST00000537497_5end | |||
|description=CAGE_peak_1_at_PHGDH_5end | |||
|id=chr1:120254548..120254571,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.66e-19!180;CL:0000057!8.95e-10!75;CL:0000548!2.01e-08!679;CL:0000004!2.01e-08!679;CL:0000255!2.01e-08!679;CL:0000012!6.49e-08!682;CL:0000066!8.77e-08!254;CL:0002321!6.90e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.27e-09,76;CL:0000066,1.46e-07,253;CL:0002321,6.85e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.89e-08!235;DOID:0050687!7.20e-08!143;DOID:14566!7.61e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.63e-08,235;DOID:14566,6.96e-08,239;DOID:0050687,7.76e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000475!7.70e-11!365;UBERON:0003102!5.54e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=158.605225103196,59.3058451178023,210.585879719381,74.0542407813165,129.171756289486,116.021023705349,83.5889597955425,138.978372153903,67.1247064473585,117.21508771122,264.46664266155,220.625785851474,103.132888487325,54.9522607142607,30.1571611912403,38.994858494203,22.9023920649111,38.7064347905308,29.7639007262209,134.078832245622,82.212278571434,363.92093163606,91.023043907676,74.3228128145761,74.9489558380973,18.4156307852563,19.5399402890871,23.2983912688491,0.393364276848904,0,1.70297735647684,53.3264310197778,81.3255980701275,267.332149350587,0,105.205232040692,36.4064544775211,3.32397245119126,0.200544447470142,0,0.223915474239924,1.29557466407592,0.257575567634187,1.30858414901608,6.80176698639857,1.69808842831471,7.43772918098191,18.0913870729603,19.5115013663915,12.0830804775303,11.7833925003386,17.2632027818667,3.44745680736619,5.16387746867061,1.35426486594342,2.25890807451126,17.4659936037021,15.0564734578207,8.87643287875617,18.2929545433373,11.5080682643827,2.30895910130701,6.58230070151385,5.11469700639233,14.5104619314292,29.5040316839393,22.4216009638407,12.5624332628372,15.644487552606,10.2078757011405,12.1079900526674,38.3008741427067,23.7346790580663,0,0,0.209658645508376,0.44931452458598,0.450530678524519,0,0,0,0.365328307529268,0,1.09227722252426,1.77901850772711,3.84057200309856,2.40237592221607,1.72425731986345,1.98313461835459,0.954053754535364,0.569212969109448,0.587237189370939,0.764546456250458,9.25199300053181,2.24203425192614,25.2848721384074,0.393419540227666,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0.589211814949674,0.221533894583621,0.541607727530031,0.25618263945135,0.520237390239513,1.47994114143309,1.93445012450094,1.73881851441031,3.85545064221357,2.67540828089713,7.31748666634838,3.39928028092699,1.14966148080576,0.34362744548263,0.253019692019503,0.95569624297229,0.651083453856419,1.90090408889675,1.6563263098555,1.79181255616186,3.74792179657038,0.473554504088034,0.821127996921047,2.01606743224732,0.534880391567015,1.73789284659359,43.8852359365131,136.822975379542,385.761349081931,214.694856516432,369.987378049286,166.863189842869,111.340032587154,124.578526797475,74.9661100111058,40.7982091331118,47.7821234170606,36.6086516016107,613.473265484641,247.684007779999,1.29818957461873,1.0447784237956,0.398873881556595,0,0,0.371457501329565,73.7408531330476,39.5707913748817,21.1755705980633,12.4367747223282,5.45349267072878,14.3061381808835,14.4206526910399,1.03366703667732,1.06729878806013,7.36385348082274,5.23678112241891,5.32190474002959,5.12530320851156,7.72092468726324,7.29127753093584,41.9708722935175,18.8604673005983,24.2114683039143,82.790984231577,93.9773002972448,44.3348220311586,0,0,340.153360671177,117.78235255179,154.109332695794,51.9043988787818,316.380792685942,100.725820544333,144.094143236573,413.118613473958,170.447275956258,49.4825546285628,87.2925155011579,35.9616186849609,147.119419670873,55.8890646745599,629.621687337412,48.0726518318694,226.477313153146,60.5267156234794,147.380295797925,126.584642495879,110.53478487467,36.1352883121161,150.472038706916,79.6641772865152,83.1602000097437,141.436683547335,393.189708357227,324.81540010094,193.586531047176,153.895779442516,13.2990775432408,76.3821060332658,78.7673635203481,87.7390264014525,106.17252343778,226.210330603655,272.072113354855,228.038725647689,225.668504255471,167.048149895509,458.60016128122,280.664219348037,199.831177373659,227.417970046238,432.419055280168,277.530444406533,196.561605091675,183.184949738573,95.4122370215753,159.726077956479,10.0495643644914,15.8192749942684,15.2006435556172,317.009662230818,332.384658950285,272.242408143282,180.681218891791,269.983310436922,212.781800341209,14.0804579096834,23.7999147131368,23.4829366299217,10.6804623447355,17.3251075600701,55.0126620185274,71.6484932831932,65.3139890984236,51.2866973205632,59.2632087931345,62.4021728262184,47.595451780538,60.0437683283559,73.4867069767606,53.8853481875993,242.618268679961,155.986550294601,127.897578905421,144.500739696887,187.719998385427,53.1710916013264,135.970634619712,108.844768110655,60.0487336044839,52.460636425323,490.071644203221,96.6083424875772,134.901364595978,310.495314960739,143.511000368582,70.7223575923839,38.4888944517255,150.400537316088,2.30986316417718,2.31492756288305,1.14152491340759,9.4824527755113,14.5942647556128,0,2.57404691653161,1.93220510975347,17.8094284574876,9.23901705093727,21.266264586358,148.667147686728,139.794924425216,239.230791799092,0.492663237895943,1.58487181223807,0.414656231081544,0.432359860250884,0.75745460055828,111.375306588464,171.894791501225,148.86615795676,152.254476960208,64.1643554468739,125.243055120914,48.5904935471983,182.885798567283,165.664826156646,99.5933921448501,123.713031980193,858.375470044518,54.099376163584,228.440842146404,145.610411675913,173.872185001208,119.153270899554,131.878978612969,167.713186561007,291.387802095205,223.921371604369,52.7692618555851,142.867563394503,104.53764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| |||
|short_description=p1@PHGDH | |||
}} |
Revision as of 20:25, 10 January 2014
Short description: | p1@PHGDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHGDH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000537497_5end |
EntrezGene: | PHGDH |
HGNC: | 8923 |
UniProt: | F5H634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.27e-09 | 76 |
epithelial cell | 1.46e-07 | 253 |
embryonic cell | 6.85e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.63e-08 | 235 |
disease of cellular proliferation | 6.96e-08 | 239 |
cell type cancer | 7.76e-08 | 143 |