FFCP PHASE1:Hg19::chr1:156052241..156052298,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92312 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33482 | |||
|TSSclassifier=strong | |||
|UniProt=A1L020 | |||
|association_with_transcript=-452bp_to_ENST00000532414,NM_001093725,uc001fnd.3_5end | |||
|description=CAGE_peak_1_at_MEX3A_5end | |||
|id=chr1:156052241..156052298,- | |||
|ontology_enrichment_celltype=CL:0000066!2.06e-21!254;CL:0002321!2.31e-16!248;CL:0000220!1.12e-15!246;CL:0002319!6.93e-12!25;CL:0000133!9.35e-12!59;CL:0000221!1.25e-10!71;CL:0000333!9.14e-09!41;CL:0002139!1.21e-08!24;CL:0000115!1.16e-07!35;CL:0000095!1.83e-07!17;CL:0000123!1.83e-07!17;CL:0000071!2.69e-07!18;CL:0002546!2.69e-07!18;CL:0002078!5.78e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.90e-13;25!CL:0002139;2.00e-09;24!CL:0000095;5.14e-08;17!CL:0000071;6.84e-08;18!CL:0000115;3.95e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.14e-20,253;CL:0002321,9.84e-15,250;CL:0000133,3.80e-13,59;CL:0002319,4.87e-13,25;CL:0000221,6.18e-11,72;CL:0002139,1.28e-09,24;CL:0000333,1.33e-09,41;CL:0000115,7.56e-09,36;CL:0002078,2.58e-08,45;CL:0000071,4.63e-08,18;CL:0002546,4.63e-08,18;CL:0000095,5.57e-08,17;CL:0000123,5.57e-08,17;CL:0000047,6.62e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002546;6.84e-08;18!CL:0000133;7.38e-07;59 | |||
|ontology_enrichment_disease=DOID:162!1.03e-15!235;DOID:14566!2.68e-15!239;DOID:0050687!2.25e-13!143;DOID:305!1.13e-08!106;DOID:3095!4.36e-08!22;DOID:2994!4.36e-08!22;DOID:0050686!5.47e-07!137;DOID:171!5.71e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.02e-08;22!DOID:2994;1.02e-08;22!DOID:171;1.25e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.08e-12,235;DOID:0050687,3.97e-11,143;DOID:14566,6.62e-11,239;DOID:3095,3.89e-09,22;DOID:2994,3.89e-09,22;DOID:171,8.19e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000119!1.57e-11!312;UBERON:0000483!3.05e-11!309;UBERON:0000487!1.66e-08!22;UBERON:0000490!7.76e-08!138;UBERON:0000475!1.54e-07!365;UBERON:0001986!2.69e-07!18;UBERON:0004638!2.69e-07!18;UBERON:0004852!2.69e-07!18;UBERON:0006914!2.91e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;8.33e-10;33!UBERON:0000487;3.04e-09;22!UBERON:0006914;2.26e-08;25!UBERON:0004638;6.84e-08;18!UBERON:0001986;6.84e-08;18!UBERON:0004852;6.84e-08;18!UBERON:0000970;2.04e-07;20!UBERON:0007625;2.73e-07;11!UBERON:0000019;4.55e-07;19!UBERON:0000047;4.55e-07;19!UBERON:0004088;4.55e-07;19!UBERON:0010230;4.55e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,1.86e-09,22;UBERON:0006914,1.47e-08,25;UBERON:0000119,3.78e-08,309;UBERON:0004638,4.63e-08,18;UBERON:0001986,4.63e-08,18;UBERON:0004852,4.63e-08,18;UBERON:0000483,6.90e-08,306;UBERON:0007625,2.92e-07,11 | |||
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| |||
|short_description=p1@MEX3A | |||
}} |
Revision as of 21:22, 10 January 2014
Short description: | p1@MEX3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEX3A_5end |
Coexpression cluster: | NA |
Association with transcript: | -452bp_to_ENST00000532414, NM_001093725, uc001fnd.3_5end |
EntrezGene: | MEX3A |
HGNC: | 33482 |
UniProt: | A1L020 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.14e-20 | 253 |
embryonic cell | 9.84e-15 | 250 |
neurectodermal cell | 3.80e-13 | 59 |
neural cell | 4.87e-13 | 25 |
ectodermal cell | 6.18e-11 | 72 |
endothelial cell of vascular tree | 1.28e-09 | 24 |
migratory neural crest cell | 1.33e-09 | 41 |
endothelial cell | 7.56e-09 | 36 |
meso-epithelial cell | 2.58e-08 | 45 |
blood vessel endothelial cell | 4.63e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.63e-08 | 18 |
neuron associated cell | 5.57e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.57e-08 | 17 |
neuronal stem cell | 6.62e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 1.86e-09 | 22 |
squamous epithelium | 1.47e-08 | 25 |
cell layer | 3.78e-08 | 309 |
blood vessel endothelium | 4.63e-08 | 18 |
endothelium | 4.63e-08 | 18 |
cardiovascular system endothelium | 4.63e-08 | 18 |
epithelium | 6.90e-08 | 306 |
pigment epithelium of eye | 2.92e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.08e-12 | 235 |
cell type cancer | 3.97e-11 | 143 |
disease of cellular proliferation | 6.62e-11 | 239 |
germ cell and embryonal cancer | 3.89e-09 | 22 |
germ cell cancer | 3.89e-09 | 22 |
neuroectodermal tumor | 8.19e-08 | 10 |