FFCP PHASE1:Hg19::chr1:159894439..159894446,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C816 | |||
|description=CAGE_peak_at_chr1:159894439..159894446,+ | |||
|id=chr1:159894439..159894446,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.72e-25!140;CL:0000037!1.16e-21!172;CL:0000566!1.16e-21!172;CL:0000623!8.16e-21!3;CL:0000825!8.16e-21!3;CL:0002032!8.53e-21!165;CL:0000837!8.53e-21!165;CL:0000988!3.22e-20!182;CL:0002031!1.17e-19!124;CL:0002087!2.60e-16!119;CL:0000766!1.50e-14!76;CL:0002274!2.27e-13!5;CL:0000457!2.27e-13!5;CL:0002191!2.27e-13!5;CL:0000097!2.27e-13!5;CL:0000831!2.27e-13!5;CL:0002028!2.27e-13!5;CL:0002393!5.68e-12!9;CL:0002397!5.68e-12!9;CL:0000838!4.05e-11!52;CL:0000542!7.07e-11!53;CL:0000051!7.07e-11!53;CL:0000763!1.53e-10!112;CL:0000049!1.53e-10!112;CL:0000767!7.85e-10!3;CL:0000839!1.30e-09!70;CL:0000557!1.88e-09!71;CL:0002057!4.08e-09!42;CL:0000084!4.75e-09!25;CL:0000827!4.75e-09!25;CL:0000860!1.96e-08!45;CL:0000094!3.32e-08!8;CL:0000134!6.38e-08!358;CL:0002320!1.13e-07!365;CL:0000163!1.25e-07!9;CL:0000219!8.34e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.87e-53;5!CL:0000163;3.09e-30;9!CL:0000775;3.27e-23;3!CL:0000094;1.35e-09;8!CL:0000151;2.79e-09;36!CL:0000766;1.07e-07;69!CL:0000081;2.47e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.87e-53,5;CL:0002028,2.87e-53,5;CL:0000163,3.09e-30,9;CL:0000775,3.27e-23,3;CL:0000094,1.35e-09,8;CL:0000766,3.42e-09,72;CL:0000151,1.85e-08,36;CL:0000081,2.47e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!2.71e-08!1;DOID:0060061!2.71e-08!1;DOID:8691!2.71e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.48e-08!80;UBERON:0001474!1.73e-07!86;UBERON:0002384!2.44e-07!375;UBERON:0002390!2.95e-07!102;UBERON:0003061!2.95e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,3.02651902175619,1.76739406796932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:159894439..159894446,+ | |||
}} |
Revision as of 21:41, 10 January 2014
Short description: | p@chr1:159894439..159894446, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:159894439..159894446, + |
Coexpression cluster: | C816_Mast_Neutrophils_CD4_CD8_Natural_colon_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.87e-53 | 5 |
basophil mast progenitor cell | 2.87e-53 | 5 |
endocrine cell | 3.09e-30 | 9 |
neutrophil | 3.27e-23 | 3 |
granulocyte | 1.35e-09 | 8 |
myeloid leukocyte | 3.42e-09 | 72 |
secretory cell | 1.85e-08 | 36 |
blood cell | 2.47e-07 | 11 |