FFCP PHASE1:Hg19::chr1:201979892..201979925,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3318 | |||
|TSSclassifier=strong | |||
|UniProt=P78545 | |||
|association_with_transcript=177bp_to_ENST00000367283_5end | |||
|description=CAGE_peak_3_at_ELF3_5end | |||
|id=chr1:201979892..201979925,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.32e-22!254;CL:0000223!5.02e-13!59;CL:0002076!1.78e-10!43;CL:0002178!1.32e-08!3;CL:0000082!3.32e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.62e-12;1!CL:1000600;2.62e-12;1!CL:1000415;9.95e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.63e-12,1;CL:1000600,2.63e-12,1;CL:0000066,5.02e-11,253;CL:1000415,9.96e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.13e-08;30!UBERON:0009497;6.94e-08;13 | |||
|ontology_enrichment_disease=DOID:305!2.78e-52!106;DOID:0050687!2.85e-38!143;DOID:299!2.10e-22!25;DOID:162!1.10e-21!235;DOID:14566!6.37e-21!239;DOID:1749!7.57e-20!14;DOID:7!1.19e-09!39;DOID:0050615!6.38e-09!16;DOID:0050686!2.92e-08!137;DOID:3119!6.00e-08!14;DOID:1324!2.15e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.76e-12;14!DOID:3111;8.62e-12;1!DOID:3603;8.62e-12;1!DOID:299;2.37e-10;25!DOID:305;1.03e-09;106!DOID:7;2.31e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.15e-29,106;DOID:0050687,2.16e-21,143;DOID:1749,2.18e-12,14;DOID:3111,5.05e-12,1;DOID:3603,5.05e-12,1;DOID:162,5.30e-12,235;DOID:14566,1.06e-11,239;DOID:299,2.06e-10,25;DOID:7,3.13e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.06e-16!169;UBERON:0000925!1.06e-16!169;UBERON:0006595!1.06e-16!169;UBERON:0001007!4.86e-16!155;UBERON:0001555!4.86e-16!155;UBERON:0007026!4.86e-16!155;UBERON:0000077!1.78e-15!130;UBERON:0004921!2.75e-15!129;UBERON:0004185!2.75e-15!129;UBERON:0002294!1.18e-12!7;UBERON:0001173!1.18e-12!7;UBERON:0004912!1.18e-12!7;UBERON:0005911!2.26e-12!82;UBERON:0005153!3.92e-11!37;UBERON:0000344!1.42e-09!12;UBERON:0001041!1.54e-09!98;UBERON:0002110!1.58e-08!3;UBERON:0006242!1.58e-08!3;UBERON:0003104!3.13e-08!238;UBERON:0009142!3.13e-08!238;UBERON:0002048!1.51e-07!22;UBERON:0000117!1.51e-07!22;UBERON:0000171!1.51e-07!22;UBERON:0000170!1.51e-07!22;UBERON:0005597!1.51e-07!22;UBERON:0000118!1.51e-07!22;UBERON:0000466!1.70e-07!126;UBERON:0005409!2.33e-07!35;UBERON:0004802!3.32e-07!19;UBERON:0000115!3.32e-07!19;UBERON:0005157!4.01e-07!51;UBERON:0001046!4.37e-07!19;UBERON:0000065!8.57e-07!53;UBERON:0005156!9.34e-07!59;UBERON:0000990!9.34e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.62e-12;1!UBERON:0001256;2.62e-12;1!UBERON:0001259;2.62e-12;1!UBERON:0000997;3.26e-12;1!UBERON:0005056;3.26e-12;1!UBERON:0004176;3.26e-12;1!UBERON:0000945;2.68e-09;5!UBERON:0010039;2.68e-09;5!UBERON:0002423;5.08e-07;25!UBERON:0002294;5.34e-07;7!UBERON:0001173;5.34e-07;7!UBERON:0001255;8.93e-07;2!UBERON:0001556;8.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.63e-12,1;UBERON:0001256,2.63e-12,1;UBERON:0001259,2.63e-12,1;UBERON:0000997,3.65e-12,1;UBERON:0005056,3.65e-12,1;UBERON:0004921,2.14e-07,118;UBERON:0005911,2.90e-07,82;UBERON:0001007,4.30e-07,145;UBERON:0001555,4.30e-07,145;UBERON:0007026,4.30e-07,145;UBERON:0009497,5.77e-07,25;UBERON:0000015,5.77e-07,25;UBERON:0002423,5.77e-07,25;UBERON:0006235,5.77e-07,25;UBERON:0004161,5.77e-07,25;UBERON:0001255,8.93e-07,2;UBERON:0001556,8.93e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505754070234305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0.334330152832435,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0.251932747854276,0,0.369254416383208,0,1.16828856491525,0.358042349351218,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.1137934482855,0.762760950878299,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,2.15583274311631,0.435296032902013,0,0,0,0,0,0,0,0.225980740780532,0,0,0,2.34661659281764,0.240476460754601,0.640358984218058,1.39866726707491,0.864542502924636,0,0.686379991447858,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,2.46068703786872,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02652102730598,1.40963004463334,0.213574825135389,0,0,0,0,0,1.27668251554036,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,1.47918486351039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0.808679663052368,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,1.40538670403555,0,0,0,0,0,0,0,0,0,1.18193840883968,0.444925607568277,0.235479278551542,0,0.560544326627578,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.671132590786754,0.294450700845729,0.243835849964539,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,1.96409332466223,0.352894871715692,0,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.336760265072938,0,0,3.66314708749385,0,0,1.52702843581198,0,0,0,0,0,0 | |||
|short_description=p3@ELF3 | |||
}} |
Revision as of 23:22, 10 January 2014
Short description: | p3@ELF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ELF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 177bp_to_ENST00000367283_5end |
EntrezGene: | ELF3 |
HGNC: | 3318 |
UniProt: | P78545 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.63e-12 | 1 |
lower urinary tract cell | 2.63e-12 | 1 |
epithelial cell | 5.02e-11 | 253 |
epithelial cell of gall bladder | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.63e-12 | 1 |
wall of urinary bladder | 2.63e-12 | 1 |
mucosa of urinary bladder | 2.63e-12 | 1 |
mammalian vulva | 3.65e-12 | 1 |
external female genitalia | 3.65e-12 | 1 |
subdivision of digestive tract | 2.14e-07 | 118 |
endo-epithelium | 2.90e-07 | 82 |
digestive system | 4.30e-07 | 145 |
digestive tract | 4.30e-07 | 145 |
primitive gut | 4.30e-07 | 145 |
epithelium of foregut-midgut junction | 5.77e-07 | 25 |
anatomical boundary | 5.77e-07 | 25 |
hepatobiliary system | 5.77e-07 | 25 |
foregut-midgut junction | 5.77e-07 | 25 |
septum transversum | 5.77e-07 | 25 |
urinary bladder | 8.93e-07 | 2 |
lower urinary tract | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.15e-29 | 106 |
cell type cancer | 2.16e-21 | 143 |
squamous cell carcinoma | 2.18e-12 | 14 |
cystadenocarcinoma | 5.05e-12 | 1 |
mucinous cystadenocarcinoma | 5.05e-12 | 1 |
cancer | 5.30e-12 | 235 |
disease of cellular proliferation | 1.06e-11 | 239 |
adenocarcinoma | 2.06e-10 | 25 |
disease of anatomical entity | 3.13e-09 | 39 |