FFCP PHASE1:Hg19::chr10:63700017..63700022,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr10:63700017..63700022,+ | |||
|id=chr10:63700017..63700022,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;4.27e-34;6!CL:0000153;2.62e-23;9!CL:0000447;2.62e-23;9!CL:0000327;1.22e-14;15!CL:0000499;1.52e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.27e-34,6;CL:0000138,4.27e-34,6;CL:0000153,2.62e-23,9;CL:0000447,2.62e-23,9;CL:0000327,1.22e-14,15;CL:0000499,1.52e-08,28;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!7.49e-07!1;DOID:4549!7.49e-07!1;DOID:5861!7.49e-07!1;DOID:6496!7.49e-07!1;DOID:3369!8.34e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;5.42e-195;1!DOID:4549;5.42e-195;1!DOID:5861;5.42e-195;1!DOID:6496;5.42e-195;1!DOID:201;4.27e-34;6!DOID:0060100;4.27e-34;6!DOID:1115;2.29e-11;20 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.42e-195,1;DOID:4549,5.42e-195,1;DOID:5861,5.42e-195,1;DOID:6496,5.42e-195,1;DOID:201,4.27e-34,6;DOID:0060100,4.27e-34,6;DOID:1115,2.29e-11,20 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.39e-66;3!UBERON:0004755;2.39e-66;3!UBERON:0001474;1.85e-12;18!UBERON:0004765;4.34e-09;26!UBERON:0001434;2.32e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.39e-66,3;UBERON:0004755,2.39e-66,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17722056089401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr10:63700017..63700022,+ | |||
}} |
Revision as of 03:01, 11 January 2014
Short description: | p@chr10:63700017..63700022, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:63700017..63700022, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.27e-34 | 6 |
chondrocyte | 4.27e-34 | 6 |
GAG secreting cell | 2.62e-23 | 9 |
carbohydrate secreting cell | 2.62e-23 | 9 |
extracellular matrix secreting cell | 1.22e-14 | 15 |
stromal cell | 1.52e-08 | 28 |
secretory cell | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.39e-66 | 3 |
skeletal tissue | 2.39e-66 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.42e-195 | 1 |
extraosseous chondrosarcoma | 5.42e-195 | 1 |
myxoid chondrosarcoma | 5.42e-195 | 1 |
extraskeletal myxoid chondrosarcoma | 5.42e-195 | 1 |
connective tissue cancer | 4.27e-34 | 6 |
musculoskeletal system cancer | 4.27e-34 | 6 |
sarcoma | 2.29e-11 | 20 |