FFCP PHASE1:Hg19::chr11:46402583..46402669,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4192 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6972 | |||
|TSSclassifier=strong | |||
|UniProt=P21741 | |||
|association_with_transcript=0bp_to_ENST00000359803,ENST00000405994,ENST00000490240,NM_001012334,uc001nco.2_5end | |||
|description=CAGE_peak_3_at_MDK_5end | |||
|id=chr11:46402583..46402669,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.27e-11!180;CL:0002321!1.38e-09!248;CL:0000220!3.77e-09!246;CL:0000222!9.18e-09!119;CL:0000393!7.00e-08!60;CL:0000211!7.00e-08!60;CL:0000183!1.23e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.08e-09,121;CL:0002321,7.06e-09,250;CL:0000393,3.15e-08,61;CL:0000211,3.15e-08,61;CL:0000187,5.90e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!7.16e-16!347;UBERON:0000119!4.25e-14!312;UBERON:0000483!5.64e-14!309;UBERON:0000468!4.06e-13!659;UBERON:0005256!4.05e-12!143;UBERON:0000475!9.31e-12!365;UBERON:0000477!4.51e-11!286;UBERON:0004111!1.14e-10!241;UBERON:0003914!2.04e-10!118;UBERON:0000490!6.82e-10!138;UBERON:0000922!8.62e-10!612;UBERON:0003104!1.91e-09!238;UBERON:0009142!1.91e-09!238;UBERON:0000467!6.12e-09!625;UBERON:0000480!7.36e-09!626;UBERON:0002100!1.76e-08!216;UBERON:0002050!4.60e-08!605;UBERON:0005423!4.60e-08!605;UBERON:0000025!5.62e-08!194;UBERON:0000923!9.21e-08!604;UBERON:0005291!9.21e-08!604;UBERON:0006598!9.21e-08!604;UBERON:0002532!9.21e-08!604;UBERON:0005172!9.25e-07!55;UBERON:0005173!9.25e-07!55 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,7.59e-15,160;UBERON:0009142,7.59e-15,160;UBERON:0000119,6.51e-14,309;UBERON:0000483,8.63e-14,306;UBERON:0005256,7.38e-11,122;UBERON:0003914,3.06e-10,117;UBERON:0004111,7.22e-10,240;UBERON:0000490,4.39e-09,148;UBERON:0002100,4.66e-08,199;UBERON:0000025,2.19e-07,192;UBERON:0000922,2.68e-07,592 | |||
|phase1_expression=1.99846217197612,0.642301571672949,2.11431606143957,1.0007329835313,0,0,5.06599756336621,5.68547886084148,2.61185628199839,8.3549538410513,13.9560233594486,70.993445942306,78.3387925338507,8.66364470720326,6.62794751455832,10.0848771967766,13.8619741445515,14.6062018077475,7.3189919818576,56.1432024830153,30.6001036866379,64.258217903008,52.6674216321144,28.1961315650141,33.0177142134331,0.840547463227464,0.985207073399349,0.472264687882075,0,0,1.54816123316076,0.919421224478927,0.90361775633475,1.10926203050036,0,0,6.45920966536664,0,0,0,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,6.60856642895129,3.36305137788922,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5710299470943,49.6318636180691,23.9102990647402,4.3372698286148,10.0267582127178,7.67686550492366,1.5905718941022,3.89307896242109,55.9646117611282,35.4767035940102,40.4918362045311,16.5688530504606,4.00724817121796,2.22470665670658,0,0.522389211897802,0.132957960518865,0,0,0,7.15544666520138,5.16140757063675,6.94281003215189,3.39184765154406,7.55098985177831,8.80377734208216,4.80688423034664,10.0782536076038,4.26919515224052,7.36385348082274,15.3075140501476,5.32190474002959,28.799322790684,3.30896772311282,17.8231228533987,6.51888016473782,6.51135180615892,4.61707069981621,0,4.74632829784064,5.49605231791222,0,0,2.18047026071267,2.48485975847659,3.67228483827281,2.38336525463794,23.5206029014027,7.09336764396714,8.97084160227691,3.20246987189115,2.71334303258876,19.6062952301853,4.58016285036939,3.92308567472301,5.2975099675726,7.49028701823999,10.3101430006871,1.24864030732128,2.85235910772225,1.34503812496621,5.04968344168189,2.10434827678571,2.38766371393822,0.61246251376468,6.1417158655884,2.27316718586684,33.2640800038975,18.0504858373347,6.37112953356618,7.18618141816238,4.37673896280572,6.50616303334214,0.831192346452549,6.14568669233173,3.37136575378922,17.2773767742586,5.67160915800105,7.17558542755448,27.5489031575952,8.05341224406335,11.7035527472917,11.4388307454667,3.60696756063881,9.1197259602479,7.76371128309825,5.55390929418832,6.31084435610286,28.1672689845436,22.307155840996,21.6555851435135,7.45565526884538,6.44330250779853,0.773043412653187,0.545492241181669,0.860413786167011,21.711319691068,18.6866973333294,38.111613261202,24.4640089836274,33.8109940173342,10.2193660541232,7.8224766164908,5.78916844373597,1.38134921352481,15.7885095530873,12.271951188383,0.354920400119532,0.505754070234305,0.241011029883482,0.110293972732394,0,0,0.674156540800822,0.392442930250692,0,14.0249536378683,28.0483547606892,75.7296180849776,126.427491791566,0,0.982827216677626,2.36315962672562,0,7.62528318967304,17.1567810298526,0.109750285408626,1.1240175325762,0,1.38882667737794,16.9420318761369,3.11980435583874,20.2063878835383,61.5590450417658,21.2509736566837,19.633836895506,18.5194205030644,18.2643986145214,0.790204397959275,9.4433477830436,0,0.468008530278475,0.297262324577456,0.93733833986777,1.34385702559088,0.850650583454319,0,0,0.766765358330422,0,0.088048434013226,0.829312462163088,0.288239906833923,0.37872730027914,1.33345578013555,1.90994212779139,4.68869788840188,0,0.719792448923265,1.8020583470635,4.57322292208925,5.94294747030412,11.3349617896653,2.71351657537515,13.1857150072933,60.80159579482,3.381211010224,25.5300591921476,4.16029747645464,13.8891982101557,2.83698264046557,6.39413229638638,112.952614989937,599.596873957545,38.6922958286961,2.28015329005615,97.022002006715,14.2551337128017,5.72734816413214,14.816068796205,3.19913571782583,0,0,0,2.87549826589899,2.29723871668228,12.8373214536647,0.868687840005475,3.6985738059069,2.68591444859843,0,0,0,0.128343036279748,29.2208817855833,39.0419561572865,32.4781301366632,17.5892078601066,14.6725912880228,0,0,0,26.3786707196151,32.511083868879,6.78162559249339,3.32753378449291,0.535286966391485,2.52323864054295,1.17141414992713,7.82459859292069,31.8370505678379,16.5556914068008,9.96338397803155,10.3246734383354,10.5998009651061,24.6709458403053,18.1866014619754,0,0,0.106727557803444,17.8845267153293,103.189972496508,309.345270076263,2.48107807818777,2.76231551918512,3.64858122762996,2.17836553734692,5.11707249066703,3.69964018630297,1.48418066444991,0.771048469013278,2.84098760501003,2.62806899244189,7.78881643775432,1.74315567689939,12.6902422071203,2.20557117333613,1.10497186723076,9.87404254215618,12.7463817604702,17.1772983596846,25.7183779357225,6.85436500229291,50.9827349964956,24.8436681910543,15.6216410761456,9.09867072567173,4.42243633718941,7.1252252313706,67.8599911837273,10.5669110642103,34.6165943959849,5.86215428003588,4.15538004464362,27.3127200761058,0,0,34.8772170158289,44.2819771694603,19.8480820745225,4.73988653579522,30.7673401789634,28.4657774726029,1.72279661398852,1.95018073810956,9.64103579064957,21.6542408974353,3.69716681075147,5.372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| |||
|short_description=p3@MDK | |||
}} |
Revision as of 07:32, 11 January 2014
Short description: | p3@MDK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MDK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359803, ENST00000405994, ENST00000490240, NM_001012334, uc001nco.2_5end |
EntrezGene: | MDK |
HGNC: | 6972 |
UniProt: | P21741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.08e-09 | 121 |
embryonic cell | 7.06e-09 | 250 |
electrically responsive cell | 3.15e-08 | 61 |
electrically active cell | 3.15e-08 | 61 |
muscle cell | 5.90e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 7.59e-15 | 160 |
entire embryonic mesenchyme | 7.59e-15 | 160 |
cell layer | 6.51e-14 | 309 |
epithelium | 8.63e-14 | 306 |
trunk mesenchyme | 7.38e-11 | 122 |
epithelial tube | 3.06e-10 | 117 |
anatomical conduit | 7.22e-10 | 240 |
unilaminar epithelium | 4.39e-09 | 148 |
trunk | 4.66e-08 | 199 |
tube | 2.19e-07 | 192 |
embryo | 2.68e-07 | 592 |