FFCP PHASE1:Hg19::chr11:50257550..50257571,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441601 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=51bp_to_uc001nhd.2_5end | |||
|description=CAGE_peak_2_at_LOC441601_5end | |||
|id=chr11:50257550..50257571,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002252;4.26e-10;1!CL:0002336;1.48e-09;1!CL:0002261;1.48e-09;1!CL:0002170;1.48e-09;1!CL:0002251;7.45e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.67e-10,58;CL:0002252,4.09e-10,1;CL:0002336,8.17e-10,1;CL:0002261,8.17e-10,1;CL:0002170,8.17e-10,1;CL:0002076,4.74e-09,42;CL:0002251,5.74e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;9.19e-10;58!UBERON:0003124;1.48e-09;1!UBERON:0004161;1.62e-07;11 | |||
|ontology_enrichment_disease=DOID:162!2.22e-08!235;DOID:305!2.47e-08!106;DOID:14566!3.05e-08!239;DOID:0050687!2.27e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3371;4.26e-10;1!DOID:4549;4.26e-10;1!DOID:5861;4.26e-10;1!DOID:6496;4.26e-10;1!DOID:5662;6.04e-10;1!DOID:4362;1.21e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.46e-10,1;DOID:4549,4.46e-10,1;DOID:5861,4.46e-10,1;DOID:6496,4.46e-10,1;DOID:5662,4.87e-10,1;DOID:4362,1.12e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0008947!3.66e-07!38;UBERON:0003258!3.66e-07!38;UBERON:0000065!9.89e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.74e-10;1!UBERON:0009842;3.74e-10;1!UBERON:0003704;3.74e-10;1!UBERON:0001171;3.74e-10;1!UBERON:0001172;3.74e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.74e-10,1;UBERON:0009842,3.74e-10,1;UBERON:0003704,3.74e-10,1;UBERON:0001171,3.74e-10,1;UBERON:0001172,3.74e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,2.21852406100073,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.340296549480063,0,0,0.423863802319124,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0.169560592310488,0.966304265816484,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.330881918197182,0,0.71181185733329,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0,1.94435734832912,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.16798212819886,1.27597587518148,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571652865261156,0.112131084345361,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09970290300263,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0,1.00253235151642,0.460404944679482,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,1.66215201785745,0.223874754722178,0,0,2.05160100093111,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0.842516912477962,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.6196469961995,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0,0,0.349934720244983,0.865999014529609,2.01090682660736,0,0.376575203107117,0,0,0.443430153536676,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0.338583555603207,0.1605880751037,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.748562161632879,0,0,0.222886768554957,0,0,0.296964680832639,0,0,0,0.222617410045812,0,0,0,0,0,1.84083628503879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.435753854075961,1.53366118706464,0.0769502585037971,6.60863923912607,0.23056390438806,0,0.434589487688032,0,0.366390373607449,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0,0.671286347903371,0.569261198172555,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0.370691816839509,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0,0.19351266257817,0.219267951258557,0.164230914106418,0,3.00070830751101,0,0,0.397429223405979,0,0,0.160317640503067,0.213452994739353,0.599428828746391,1.87317542300338,0.229073192331831,0.686379991447858,0.720273989940749,0.124252535565433,0,0,0.313808538937,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0.679872549120754,0,1.32506888912221,0.129282956361551,0,0,0,0,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0.573409195690071,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.845248493434508,0.79994958341972,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0.471797825567689,0.109209638192014,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,1.57036349601641,0.353909170043221,0,0.231051332300676,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1531308121143,0,2.57232014156128,0.0679697329768317,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0.22910686854405,0,0,0.223710863595585,0,1.09726132484042,0,0,0,0,2.33939463462106,0.198950775161368,0,0.11294608203896,0,0.301925687133347,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0.633492505057185,0.407955318967927,0,2.29737248837112,1.25353769646188,0.530450887527676,0.267964130156178,0,0,0,0,0,0,1.56984607612859,0,0,0.217716747896961,0.342233301085281,0,0,0.332660356546013,0.569822880276821,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@LOC441601 | |||
}} |
Revision as of 07:41, 11 January 2014
Short description: | p2@LOC441601 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC441601_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_uc001nhd.2_5end |
EntrezGene: | LOC441601 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.67e-10 | 58 |
epithelial cell of esophagus | 4.09e-10 | 1 |
buccal mucosa cell | 8.17e-10 | 1 |
endothelial cell of viscerocranial mucosa | 8.17e-10 | 1 |
keratinized cell of the oral mucosa | 8.17e-10 | 1 |
endo-epithelial cell | 4.74e-09 | 42 |
epithelial cell of alimentary canal | 5.74e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.74e-10 | 1 |
acinus | 3.74e-10 | 1 |
intrahepatic bile duct | 3.74e-10 | 1 |
portal lobule | 3.74e-10 | 1 |
hepatic acinus | 3.74e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.46e-10 | 1 |
extraosseous chondrosarcoma | 4.46e-10 | 1 |
myxoid chondrosarcoma | 4.46e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 4.46e-10 | 1 |
pleomorphic carcinoma | 4.87e-10 | 1 |
cervical cancer | 1.12e-07 | 5 |