FFCP PHASE1:Hg19::chr11:61584457..61584480,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3574 | |||
|TSSclassifier=strong | |||
|UniProt=O60427 | |||
|association_with_transcript=48bp_to_NM_013402,uc010rlm.1_5end | |||
|description=CAGE_peak_4_at_FADS1_5end | |||
|id=chr11:61584457..61584480,- | |||
|ontology_enrichment_celltype=CL:0000066!1.04e-13!254;CL:0000333!1.72e-08!41;CL:0000133!2.54e-08!59;CL:0000148!4.62e-07!10;CL:0000541!4.62e-07!10;CL:0000147!8.27e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.61e-07;10!CL:0000147;6.17e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.26e-13,253;CL:0000333,1.44e-08,41;CL:0000133,2.76e-08,59;CL:0000148,3.99e-07,10;CL:0000541,3.99e-07,10;CL:0000147,7.19e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.05e-18!235;DOID:14566!6.28e-17!239;DOID:0050687!4.48e-15!143;DOID:305!4.15e-10!106;DOID:0050686!4.80e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.81e-18,235;DOID:14566,5.70e-17,239;DOID:0050687,6.32e-15,143;DOID:305,5.27e-10,106;DOID:0050686,2.98e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.36e-08!94;UBERON:0001016!2.36e-08!94;UBERON:0000064!2.18e-07!219 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.04e-07,89 | |||
|phase1_expression=1.63510541343501,1.71280419112787,2.11431606143957,5.00366491765652,3.12872766099101,3.48935409640147,2.53299878168311,2.52687949370732,0.783556884599516,1.96587149201207,1.39560233594486,5.24259293112413,4.22027165165526,0.866364470720326,0.994192127183747,0,0.602694528023977,1.46062018077475,4.87932798790507,4.43235809076436,4.48801520737357,1.56727360739044,2.57612388417951,3.55873505189499,3.89182182743889,3.82067028739756,2.05251473624864,1.25937250101887,0.393364276848904,0,0.464448369948228,0.919421224478927,2.71085326900425,2.58827807116751,0,1.13735385989937,2.34880351467878,2.76997704265939,1.40381113229099,0.651032612147555,2.23915474239924,2.26725566213286,0.77272670290256,0.581592955118259,0,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0.797854630486527,0.852449501065388,0.580418477257168,0,0.622822248995575,0.75374599577023,0.521482918420201,0,0,0.368277635987565,0.316462387440884,1.47878700418359,0.425208599930087,0.628975936525128,0.786300418025466,0.750884464207532,0.32145117339416,0.855038231223746,0,0,0,0,0,0,0,0,0,0.954053754535364,1.1384259382189,1.17447437874188,0.382273228125229,6.60856642895129,1.68152568894461,2.10707267820062,0,0.393010762749165,0.411202997999018,2.34061093546949,0.977766799900771,1.89379122293893,0,1.89397776704795,0.294605907474837,0.443067789167242,0.270803863765016,1.66518715643378,1.04047478047903,1.80881695064044,2.76350017785848,2.02862160014537,1.4828656316206,0.267540828089713,1.04535523804977,5.32553910678561,1.14966148080576,0.68725489096526,0.506039384039006,0.318565414324097,0.651083453856419,0,0.301150238155546,0.895906278080929,2.49861453104692,0.473554504088034,0,0.604820229674197,0,0.434473211648397,0,0.670700859703636,1.66221330396589,0.722878304769133,0.50133791063589,1.01392563272577,2.3858578411533,1.45990461090791,2.83604451492204,2.21729397462564,2.72287835648691,2.29213382120997,1.45718115317017,2.59549109949101,2.59637914923747,2.08955684759121,2.52620124985844,3.33886874027479,0.571994910780128,0.74291500265913,4.96906018416763,0.860234595106124,3.81854551768354,1.69592382577203,2.93649605346934,4.40188867104108,2.08994966536811,3.35941786920128,2.49036383880697,4.35136796594071,4.83395180530976,0.760272105718513,1.95249646038536,2.94130464276695,2.43042584364528,3.48268940307911,3.81699933464489,4.72968218029953,7.66583187329416,1.89853131913626,3.66403487860815,0,0,1.74437620857014,1.49091585508596,0.886413581652058,0.662045904066094,5.73673241497627,2.83734705758686,0.560677600142307,2.1349799145941,2.4666754841716,1.55605517699883,2.2900814251847,4.57693328717684,6.05429710579726,4.03323147135999,7.26396438684769,1.24864030732128,2.85235910772225,2.24173020827702,3.17073146338165,2.91371299862637,3.51127016755621,1.42907919878425,1.71968044236475,1.65321249881225,2.37600571456411,1.23633464639278,2.73048408581408,2.87447256726495,2.02003336744879,3.1279629967991,0.831192346452549,1.31693286264251,1.22595118319608,1.80285670687916,1.36118619792025,2.87023417102179,2.77624605464138,0.847727604638247,3.90118424909723,1.44273540933814,2.83404594050192,1.67505170698431,1.68776332241266,1.26668106709558,2.27190396819703,2.02509777013059,2.42469085228218,5.32514388774922,1.5112814734146,1.18692414617341,2.51239109112286,1.36373060295417,2.86804595389004,9.02605425359006,13.2529768321485,11.6193942869518,8.60386756627575,7.56962552626885,4.37972830890996,1.56449532329816,1.92972281457866,1.38134921352481,1.85747171212792,1.44375896333917,5.56041960187266,3.87744787179634,5.78426471720357,4.30146493656336,4.57546832594053,5.69449485866632,5.39325232640658,4.31687223275761,3.8474715694639,5.16708818237254,2.80483547606892,1.2347220339942,1.47008711385542,0,1.96565443335525,1.18157981336281,1.32438929824395,5.16551441881077,1.20097467208968,1.42675371031213,2.24803506515239,2.6137532827024,3.05541869023148,2.28065813717227,1.03993478527958,2.88662684050547,3.70977295920246,2.46558257895225,1.87676382089396,0.925971025153221,1.14152491340759,0,3.43394464837949,2.21595305478658,0.702012795417713,1.18904929830983,0,1.17587489739202,0.708875486211932,1.34337784054272,0.581267877027924,2.68367875415648,4.92663237895944,8.98094026934906,4.97587477297853,4.61183850934277,4.92345490362882,6.54028311209341,8.78573378784039,15.2382681373061,10.2643467613623,13.8817115149487,5.1058319833466,8.00314011365619,5.49442313292267,6.10344096366592,2.933531432838,1.68053230485111,3.57656445851882,1.690605505112,3.45719551560332,3.12022310734098,2.57207374262142,0,3.99633268524149,2.43062589218851,0.542621605391443,3.29296134712308,2.28015329005615,2.13235169245527,0.791951872933429,0.602878754119172,0.871533458600294,0.699810938274399,3.64871341923571,2.51128545716063,2.10833939483032,4.55287225434007,2.29723871668228,1.42636905040718,1.88215698667853,1.43833425785268,0.537182889719687,3.36255431980582,0.591092280605782,0.431255149719035,1.02674429023799,1.77866236955724,2.60279707715243,0.773288812777695,4.02039036802437,3.18969375826582,0,2.99161459204025,0.414415513436035,1.47229790062968,0.500170521059677,1.89885516589815,2.28767947683888,1.60586089917446,2.20783381047509,3.39710103478868,1.50473049863859,2.27407504055985,2.0694614258501,1.99267679560631,1.47495334833363,1.21637060255316,5.286631251494,6.17658162859541,0.620304078368662,1.2942852049117,1.38745825144478,0,1.66435439510497,3.62868351995616,1.24053903909388,3.83654933220156,1.12264037773229,1.40953064181271,2.04682899626681,3.37793234401576,0,0.616838775210622,1.42049380250502,1.14978018419333,1.03850885836724,0.348631135379878,3.2632051389738,2.20557117333613,2.76242966807689,1.03333003348146,2.1850940160806,0.786746489756545,9.47519187105565,8.16362573306797,3.92174884588428,5.84556898613043,7.28306239360842,4.54933536283586,7.14393562161366,2.80690690932781,4.62681758070868,3.52230368807009,7.02365683396795,7.90116446439619,3.3243040357149,4.47749509444357,1.09629938322967,1.0457418040996,5.38545262744417,5.9042636225947,2.92840555197873,1.75169719801128,3.84591752237042,4.29049399587058,0.574265537996172,0.650060246036521,1.6068392984416,1.06337790121334,2.00263202249038,2.14905144616581,3.30807773962873,2.36324538710202,2.61030049045611,1.36362603865761,2.40386496246191,2.97512847649761,2.69066094311149,2.80747967488085,6.67641353646629,2.32422774648643,5.98143458978216,1.3940745403212,1.23213432070436,1.06461206063404,0.869932992075073,3.52116016297448,2.86249773483982,2.97726695487734,0.949138274156178,1.71567174531442,1.27948895655667,0.42793898803392,0.318203247925937,2.35484592059769,1.61885211824983,0.823611089208164,0.942499218765491,1.41527737101321,1.58510321173008,0.421258456238981,1.95053495635836,0.243713489631284,1.05650146756755,2.32049849393576,0.989838023675989,0,2.2054613741845,1.32687795048244,2.19225442626881,1.15755106853338,3.27947376023316,0.811641507850816,1.54911749049875,2.53526042279017,1.29070216983646,1.57198465620994,2.49669736036875,1.06428319221179,0.844430541190656,1.31717957183961,1.89736586882858,3.49934720244983,3.27155183266741,2.01090682660736,4.3556393944529,1.69458841398202,3.87454835404107,5.05414427002877,1.7737206141467,4.13502120372527,1.01489521846434,0,0.569647187174163,0.476463550915578,0.411362273086194,1.29694662238543,0.540031437238115,0,3.95249063171651,13.474717973687,1.96032172784825,5.945701604023,2.59684583357601,2.41882267384608,5.7393458182376,3.5924286857907,2.8725805519855,3.17510374085824,3.57084134302011,5.89674074038263,1.36940807419915,0,5.01268954180134,1.69291777801603,0.1605880751037,1.81619736471943,0.851692475380653,1.37402137902306,2.15068535015921,0.447352215784832,1.33479313369527,2.14926904942244,3.61928026063815,2.46174797895425,7.30230331885154,6.6614393599564,7.04935025439248,0,1.02555725490326,25.8497911326464,4.1234052182667,5.68272293612826,0.23874448473769,0,0,2.98244294329889,4.22008249231538,1.66963057534359,1.31843099381408,3.58913193817589,2.19172787076177,2.21027132424918,5.54252045279407,7.77241987016376,6.52349468943668,2.17727711363265,8.44762500784872,2.14825409610731,1.53471711068062,2.26879832964947,0,3.33410970433911,2.90799823828566,3.52518773015035,15.9691038400955,1.82299432759663,2.79871999987826,0.724999575434793,3.86897724170699,4.06805840468426,2.12748913591143,5.8606373451049,1.45802306691627,3.99337488346572,1.77148277162768,3.37670028151142,4.5774520895125,3.53853631779919,4.72876190325676,1.75508317723178,15.3603233561776,3.06732237412927,2.84715956464049,1.25336261431701,4.15015027898508,2.06442582142476,3.25942115766024,1.27600463892768,2.10674464824283,0.533034776018635,0,2.19772358953035,5.98362054840563,22.3339704011009,25.4881294613061,16.2786939366567,8.34916423986414,5.2449071063525,7.59593032300897,2.44849212238722,2.40300221437699,9.52110014865201,1.99052386215701,0.973033209536731,1.22206028986725,8.00607047437679,8.5259117873087,8.6670218089528,3.16785325009182,4.81546588379273,2.57690890297873,1.27718352450966,2.54364004611717,5.34116834975004,2.36750641709634,2.41981432097328,14.0793470350025,0.63186579628488,3.45743864653333,2.59220478493118,5.98188485436467,5.29587129400798,5.65079253133006,5.97362148864794,1.99226682220855,6.37903495860438,0.520679215005393,0.881931576729399,16.1059532173745,0.873633341210151,5.33156700662011,8.51455715343949,12.4251839046515,9.27904664701264,1.45483524732629,3.53024506766001,5.64951851951331,4.38534158869603,5.56400912768371,2.27918865441163,5.08433595110488,3.44682927081595,2.34798294213288,2.19790570540343,6.33997835478066,10.7664400395961,4.46146994441108,0.864328787928898,1.49103042678519,2.12124631155116,2.17446729717782,3.13808538937,3.16194474672598,6.35691297783342,3.60252173225874,1.9166753044879,1.27746588066972,3.43812353135966,3.94331031418972,3.6306712165393,3.20824593616357,3.58936512288407,7.38812301846267,1.71690419254628,3.12440040418622,5.3746777989381,3.24269895188163,8.15471646692177,2.04836273998782,2.55489160981616,2.76354529802158,2.26383207483922,4.14899327122344,3.18091875923721,2.86027152834309,12.6994987287365,10.590536617987,10.8014487887588,0.2249738915515,0,2.36923270966296,0,1.26089131678717,4.14391246266485,5.49121749900914,5.55790751931819,9.97959026061116,1.42939065274673,1.32418394073086,3.051222451857,1.62899880526114,0,0.653174720218818,4.7892076624995,7.38832686744051,2.72620834856675,5.77891666752641,1.02586563574658,6.62534444561107,2.84422503995411,2.90911723833918,15.055641733821,1.40963004463334,3.9511342650047,3.30129040709298,3.72815149812476,1.48849806543585,0.395223263795889,2.80122976276061,1.91502377331055,0,0.2506898940227,0,0.983617892129413,3.76929831000562,1.77213635993397,2.07444650333337,3.254964198369,3.44045517414043,3.43880059764242,3.41530216177609,5.67229403238546,3.37447101497688,3.4879297034579,2.56918800190471,1.17632909849086,5.62001886968258,4.20270982971393,1.19403842309499,2.10341978862502,1.66441758450784,0.757612021100357,1.0062716070103,0,3.20376095755693,2.26846385644859,2.33155800874171,1.77426179987561,2.70804504178294,4.49803112163605,1.70789252563885,2.48823724704513,1.86089200190596,1.04349012362347,1.05180326298053,1.14241563650639,2.44122439922797,2.00033525122815,2.7926744831047,2.32016879939247,0.796191777397232,3.20022211730523,0.686791410365586,1.34699795506368,6.30924491143255,5.39335525140449,1.07220795687463,2.08795433572169,1.13352962756136,2.54674721756217,1.95789363605174,2.8654214573038,0.926404341482917,1.53498834705095,3.35709377297174,0.964570191354574,2.36519416914302,2.30617366729152,3.10887307558079,5.77333916737026,2.48865185073115,1.36402216187572,1.99297260470045,1.30852315404675,3.93131818615695,1.96618327002975,0.422624246717254,10.5993319803113,1.92045113449454,1.20550485762571,13.0528669320372,2.57748330352577,4.75590326246111,0.622077260032973,10.4873384468994,10.1355322712881,3.30258477897382,16.3814457288021,2.0367903594483,3.61377364172861,1.98297222814403,8.9383186875719,2.22603045457393,4.88942819007771,0.80057074828547,3.17408349321616,2.1437183414724,2.50493977876192,4.25089728976755,2.07524016774297,1.8460472781668,9.32665276020357,2.14387482639075,2.74508597574147,5.71077681036618,5.29997679905538,8.96569897442827,0.550285795565037,2.88814165375846,1.1441462864015,13.807198521202,4.77398933079059,5.18951265609875,1.81534561833168,4.68908406739856,3.92860041722134,5.076929442813,1.6264169483875,3.24180406168294,0,2.48024155801421,2.72687983833799,8.75159694429151,0,0.992422356778588,8.61769097362141,2.6830109804315,3.21421101526972,1.3451348888753,1.82089681270989,1.36597314810779,1.33053555243958,5.64646539023318,1.54339208493677,2.71878931907327,2.23627430113687,3.90039674917095,3.78186766433035,2.43328587836593,2.04250266890802,7.5673484094723,0,1.94334832096759,7.6440270061928,6.93322478513567,5.05643557544725,7.90441692503252,3.30330717374901,0.801711364730253,0.828864656652147,1.3657478167516,1.38251932362818,0,2.48497201534187,3.40853619036631,2.54032230114557,4.582137370881,5.89392132762208,5.7332336338646,1.11855431797792,0,3.65753774946808,0,0.307988420568741,2.3196288626764,3.39997695141398,4.44484980578001,5.96852325484105,18.7893743428558,3.9531128713636,8.24553875590718,6.49140227336696,0.771741581079447,0.874238242015829,0.470317296361523,2.69663153929296,5.18488403623577,3.33724394095407,2.0793248022896,2.9585900930838,2.0391253762538,0.469919589899268,3.02952073475813,1.69899965072379,3.03541695629618,0.705789743431384,2.88868920081006,2.92134555298607,0,2.00675416412032,2.83988811947732,2.17572768610927,12.6541700198709,1.5870805215462,0,2.31087814315709,1.73050624849516,5.55132269274347,9.7246359047689,8.10870406473197,7.75115106039061,9.08539177902906,6.61643276650883,1.75495277504663,2.04602485189246,1.07185652062471,2.48750831837634,3.62015485516633,0.639701945702943,0.476128862927481,3.1648565819643,2.60713800042603,5.27019754128883,1.01835453245064,1.81905470062397,0,0.684466602170562,1.0776328482334,1.36272190246085,0.99798106963804,4.55858304221457,6.08345871502978,1.9307228228694,1.88632924423832,0,5.01189921149752,4.06896178315738,0.665756774185513,1.20764276154616,4.48795889224526 | |||
|short_description=p4@FADS1 | |||
}} |
Revision as of 08:02, 11 January 2014
Short description: | p4@FADS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FADS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_NM_013402, uc010rlm.1_5end |
EntrezGene: | FADS1 |
HGNC: | 3574 |
UniProt: | O60427 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.26e-13 | 253 |
migratory neural crest cell | 1.44e-08 | 41 |
neurectodermal cell | 2.76e-08 | 59 |
melanocyte | 3.99e-07 | 10 |
melanoblast | 3.99e-07 | 10 |
pigment cell | 7.19e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.04e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.81e-18 | 235 |
disease of cellular proliferation | 5.70e-17 | 239 |
cell type cancer | 6.32e-15 | 143 |
carcinoma | 5.27e-10 | 106 |
organ system cancer | 2.98e-08 | 137 |