FFCP PHASE1:Hg19::chr11:104125404..104125415,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr11:104125404..104125415,+ | |||
|id=chr11:104125404..104125415,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.80e-07;6!CL:0002149;8.97e-07;6!CL:0002255;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,8.02e-07,6;CL:0000138,8.02e-07,6;CL:0002149,8.97e-07,6;CL:0002255,8.97e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1115!4.21e-22!20;DOID:3371!3.98e-14!1;DOID:4549!3.98e-14!1;DOID:5861!3.98e-14!1;DOID:6496!3.98e-14!1;DOID:201!2.78e-09!6;DOID:0060100!2.78e-09!6;DOID:4231!1.99e-07!2;DOID:1907!1.99e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3371;3.05e-34;1!DOID:4549;3.05e-34;1!DOID:5861;3.05e-34;1!DOID:6496;3.05e-34;1!DOID:1115;1.29e-15;20!DOID:201;7.80e-07;6!DOID:0060100;7.80e-07;6!DOID:3001;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.61e-34,1;DOID:4549,3.61e-34,1;DOID:5861,3.61e-34,1;DOID:6496,3.61e-34,1;DOID:1115,1.29e-15,20;DOID:201,8.02e-07,6;DOID:0060100,8.02e-07,6;DOID:3001,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.67e-26!2;UBERON:0002757!1.67e-26!2;UBERON:0010134!1.67e-26!2;UBERON:0002784!1.67e-26!2;UBERON:0005408!1.67e-26!2;UBERON:0001899!1.67e-26!2;UBERON:0003296!9.15e-14!4;UBERON:0010133!9.15e-14!4;UBERON:0001894!2.99e-08!7;UBERON:0006222!2.99e-08!7;UBERON:0002360!1.75e-07!2;UBERON:0000094!1.75e-07!2;UBERON:0007645!1.75e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.45e-66;2!UBERON:0002757;1.45e-66;2!UBERON:0010134;1.45e-66;2!UBERON:0005408;1.45e-66;2!UBERON:0001899;1.45e-66;2!UBERON:0003296;5.98e-34;4!UBERON:0010133;5.98e-34;4!UBERON:0002784;5.98e-34;4!UBERON:0001894;6.48e-20;7!UBERON:0002418;2.19e-12;3!UBERON:0004755;2.19e-12;3!UBERON:0002369;3.24e-12;3!UBERON:0001235;3.24e-12;3!UBERON:0006858;3.24e-12;3!UBERON:0002368;1.55e-08;33!UBERON:0000949;3.18e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.45e-66,2;UBERON:0002757,1.45e-66,2;UBERON:0010134,1.45e-66,2;UBERON:0005408,1.45e-66,2;UBERON:0001899,1.45e-66,2;UBERON:0003296,5.98e-34,4;UBERON:0010133,5.98e-34,4;UBERON:0002784,5.98e-34,4;UBERON:0001894,6.48e-20,7;UBERON:0006222,6.48e-20,7;UBERON:0002418,2.31e-12,3;UBERON:0004755,2.31e-12,3;UBERON:0002369,3.24e-12,3;UBERON:0001235,3.24e-12,3;UBERON:0006858,3.24e-12,3;UBERON:0002368,3.06e-09,35;UBERON:0000949,2.44e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6699314784893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32819215231533,0,0,0,0,0,0,0,0,0,5.11885534810702,0,0,0,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28561468702629,25.5575628886306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.92831269377439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:104125404..104125415,+ | |||
}} |
Revision as of 10:05, 11 January 2014
Short description: | p@chr11:104125404..104125415, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:104125404..104125415, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 8.02e-07 | 6 |
chondrocyte | 8.02e-07 | 6 |
epithelial cell of uterus | 8.97e-07 | 6 |
stromal cell of endometrium | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.45e-66 | 2 |
regional part of epithalamus | 1.45e-66 | 2 |
secretory circumventricular organ | 1.45e-66 | 2 |
circumventricular organ | 1.45e-66 | 2 |
epithalamus | 1.45e-66 | 2 |
gland of diencephalon | 5.98e-34 | 4 |
neuroendocrine gland | 5.98e-34 | 4 |
regional part of diencephalon | 5.98e-34 | 4 |
diencephalon | 6.48e-20 | 7 |
future diencephalon | 6.48e-20 | 7 |
cartilage tissue | 2.31e-12 | 3 |
skeletal tissue | 2.31e-12 | 3 |
adrenal gland | 3.24e-12 | 3 |
adrenal cortex | 3.24e-12 | 3 |
adrenal/interrenal gland | 3.24e-12 | 3 |
endocrine gland | 3.06e-09 | 35 |
endocrine system | 2.44e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.61e-34 | 1 |
extraosseous chondrosarcoma | 3.61e-34 | 1 |
myxoid chondrosarcoma | 3.61e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 3.61e-34 | 1 |
sarcoma | 1.29e-15 | 20 |
connective tissue cancer | 8.02e-07 | 6 |
musculoskeletal system cancer | 8.02e-07 | 6 |
female reproductive endometrioid cancer | 8.97e-07 | 6 |