FFCP PHASE1:Hg19::chr12:15114627..15114631,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=397 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=679 | |||
|TSSclassifier=strong | |||
|UniProt=P52566 | |||
|association_with_transcript=-24bp_to_ENST00000228945_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_10_at_ARHGDIB_5end | |||
|id=chr12:15114627..15114631,- | |||
|ontology_enrichment_celltype=CL:0000037!1.98e-22!172;CL:0000566!1.98e-22!172;CL:0002032!7.77e-22!165;CL:0000837!7.77e-22!165;CL:0000988!6.30e-21!182;CL:0002031!6.61e-16!124;CL:0000738!2.30e-14!140;CL:0002087!6.27e-14!119;CL:0000763!3.31e-13!112;CL:0000049!3.31e-13!112;CL:0000542!1.23e-08!53;CL:0000051!1.23e-08!53;CL:0000838!1.80e-08!52;CL:0000839!5.00e-08!70;CL:0000557!5.66e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.54e-09;3!CL:0002621;1.98e-08;3!CL:0000624;2.26e-07;6!CL:0000764;4.16e-07;2!CL:0000558;4.16e-07;2!CL:0000084;4.98e-07;25!CL:0000317;5.87e-07;2!CL:1000448;5.87e-07;2!CL:0002308;5.87e-07;2!CL:0002140;5.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.05e-09,3;CL:0000037,2.76e-09,168;CL:0002032,2.85e-09,161;CL:0000837,2.85e-09,161;CL:0000988,2.06e-08,177;CL:0002621,3.61e-08,3;CL:0000624,1.92e-07,6;CL:0002031,2.94e-07,120;CL:0000764,4.22e-07,2;CL:0000765,4.22e-07,2;CL:0000050,4.22e-07,2;CL:0000038,4.22e-07,2;CL:0000558,4.22e-07,2;CL:0000547,4.22e-07,2;CL:0000549,4.22e-07,2;CL:0000550,4.22e-07,2;CL:0000552,4.22e-07,2;CL:0000084,4.87e-07,25;CL:0000827,4.87e-07,25;CL:0000317,5.95e-07,2;CL:1000448,5.95e-07,2;CL:0002308,5.95e-07,2;CL:0002140,5.95e-07,2;CL:0000838,8.92e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.44e-11!51;DOID:0060083!2.44e-11!51;DOID:1240!1.15e-10!39;DOID:8692!7.81e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.24e-08!112;UBERON:0002390!4.33e-08!102;UBERON:0003061!4.33e-08!102;UBERON:0003081!9.15e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.05e-09;10!UBERON:0000158;1.05e-09;10!UBERON:0003124;1.54e-09;3!UBERON:0000920;1.54e-09;3!UBERON:0001949;1.98e-08;3!UBERON:0002419;5.87e-07;2!UBERON:0007771;5.87e-07;2!UBERON:0003297;5.87e-07;2!UBERON:0001821;5.87e-07;2!UBERON:0003487;5.87e-07;2!UBERON:0001820;5.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.05e-09,3;UBERON:0005631,3.40e-09,14;UBERON:0000158,3.40e-09,14;UBERON:0001949,3.61e-08,3;UBERON:0003124,4.54e-07,7;UBERON:0002419,5.95e-07,2;UBERON:0007771,5.95e-07,2;UBERON:0003297,5.95e-07,2;UBERON:0001821,5.95e-07,2;UBERON:0003487,5.95e-07,2;UBERON:0001820,5.95e-07,2;UBERON:0005089,5.95e-07,2;UBERON:0005088,5.95e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,1.31883489114227,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.764134057479513,0.738905305049512,0.550975469195755,0.393364276848904,1.53531759238885,0.464448369948228,0,0.90361775633475,0,0.232401601740905,0.568676929949686,0.293600439334847,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0.242584061187816,0.697287110717054,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,1.03423704220986,0,0,0.564727018627814,0.272906150057846,0.674170453335254,0.306083892370903,0.320929027076094,1.91801137739712,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0.425208599930087,0.838634582033504,0.22465726229299,0.150176892841506,0.32145117339416,1.14005097496499,1.19350006319454,0.91332076882317,0,0,0,0,0,0,0,0,0,1.17447437874188,1.14681968437569,0,0,1.05353633910031,1.180258620683,1.17903228824749,1.85041349099558,0.334372990781356,2.93330039970231,1.89379122293893,0,0.111410456885174,0.883817722424512,1.77227115666897,0.812411591295047,0.512365278902701,0,0.493313713811028,0.552700035571697,0.289803085735052,1.18629250529648,0.802622484269139,1.04535523804977,0.566546713487831,0,0,0.759059076058509,0,0,0,0.150575119077773,0.127986611154418,0,0,0.821127996921047,1.20964045934839,0.534880391567015,1.44824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0.364295288292542,4.82019775619758,0.649094787309367,1.0447784237956,0.398873881556595,0,0,0,2.38514888840046,0,0,1.13061588384802,0.419499436209906,0.825354125820202,0.626984899610432,0,0.35576626268671,0.33472061276467,0,0,0,1.47065232138347,0.81014194788176,0.357198913136319,0,0.225222960966644,0,0,0.732806975721629,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.817309515567294,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0.206105058476878,0,0,0,0.194874010322397,0,0,0,0.355009592516614,0.302256294682921,0,1.15956511897978,1.36373060295417,1.14721838155602,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0.98775256867763,0,1.50793458617446,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0.738651018262192,1.40402559083543,1.33768046059855,1.87467667973554,0.335964256397719,0.425325291727159,0.53735113621709,0,0,1.47798971368783,0.792435906119034,0.207328115540772,0.864719720501769,0.88369703398466,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.77327684181734,0.862510299438069,1.15508732651774,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.853820462427555,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0.223874754722178,3.06963827304308,3.39866086332371,0,0,0,1.54561517471583,0,0,2.29706215198469,2.60024098414608,0,0,0,0,0,0,0,0,0,0.495854746082934,0.384380134730212,0.765676274967505,0,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.808729926293264,0,0.842516912477962,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0.673554789078584,0.670302275535787,0,1.03558180854457,1.29151611801369,1.68471475667626,0.886860307073351,0,0,1.52927441428475,0,0,0,0.648473311192717,0,0.79312517629427,0,0,6.12600539952579,0.185803175125719,0.28853842595289,0.782560276832555,0.797131363644112,0.59873811429845,0.5745161103971,0.635020748171649,0.973865820823666,0,0,4.0736772900986,2.50634477090067,0.846458889008016,0.481764225311099,0.403599414382095,0.425846237690326,1.03051603426729,0,0.223676107892416,0.166849141711909,1.17232857241224,1.67043704337145,1.23087398947712,0.540911356951966,0.33307196799782,2.81974010175699,0,0.146508179271894,0,0.222886768554957,0,3.34242278632766,0.593929361665277,1.22864280839693,0,0,0,0,0,0.398495976502139,0,0,0,0.984678443688556,0,0.269605053441981,0,0,0.295930216910801,0,0,0,0,0,0,2.44887999989348,0.724999575434793,1.2517279311405,0,0,0,0.291604613383254,0,0.885741385813839,0.120596438625408,0,0,0,0,0,1.39423744278603,0.307801034015188,0,0.23056390438806,0,0,9.57003479195758,1.55715908783166,14.9249737285218,1.02193298195737,0.941881538370149,0.498635045700469,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,0,0.123563938946503,0.313265848516366,0.134802265961354,0,0,0,0.391329237864179,0,0,0,0,0.31593289814244,0,0,0,0.330991955875499,0,0,0,0,0,0.489961987071888,1.30588809870604,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,1.8402114799552,1.11712960508902,0.229160424011684,0,0.199679000498991,0.429226048136571,0.2231714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| |||
|short_description=p10@ARHGDIB | |||
}} |
Revision as of 12:26, 11 January 2014
Short description: | p10@ARHGDIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARHGDIB_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -24bp_to_ENST00000228945_5end |
EntrezGene: | ARHGDIB |
HGNC: | 679 |
UniProt: | P52566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.05e-09 | 3 |
hematopoietic stem cell | 2.76e-09 | 168 |
hematopoietic oligopotent progenitor cell | 2.85e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.85e-09 | 161 |
hematopoietic cell | 2.06e-08 | 177 |
gingival epithelial cell | 3.61e-08 | 3 |
CD4-positive, alpha-beta T cell | 1.92e-07 | 6 |
hematopoietic lineage restricted progenitor cell | 2.94e-07 | 120 |
erythroid lineage cell | 4.22e-07 | 2 |
erythroblast | 4.22e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 4.22e-07 | 2 |
erythroid progenitor cell | 4.22e-07 | 2 |
reticulocyte | 4.22e-07 | 2 |
proerythroblast | 4.22e-07 | 2 |
basophilic erythroblast | 4.22e-07 | 2 |
polychromatophilic erythroblast | 4.22e-07 | 2 |
orthochromatic erythroblast | 4.22e-07 | 2 |
T cell | 4.87e-07 | 25 |
pro-T cell | 4.87e-07 | 25 |
sebum secreting cell | 5.95e-07 | 2 |
epithelial cell of sweat gland | 5.95e-07 | 2 |
epithelial cell of skin gland | 5.95e-07 | 2 |
acinar cell of sebaceous gland | 5.95e-07 | 2 |
lymphoid lineage restricted progenitor cell | 8.92e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.05e-09 | 3 |
extraembryonic membrane | 3.40e-09 | 14 |
membranous layer | 3.40e-09 | 14 |
gingival epithelium | 3.61e-08 | 3 |
chorion | 4.54e-07 | 7 |
skin gland | 5.95e-07 | 2 |
epidermis gland | 5.95e-07 | 2 |
gland of integumental system | 5.95e-07 | 2 |
sebaceous gland | 5.95e-07 | 2 |
skin sebaceous gland | 5.95e-07 | 2 |
sweat gland | 5.95e-07 | 2 |
sweat gland placode | 5.95e-07 | 2 |
sebaceous gland placode | 5.95e-07 | 2 |