FFCP PHASE1:Hg19::chr12:57625582..57625598,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6472 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10852 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=351bp_to_ENST00000555213_5end | |||
|description=CAGE_peak_11_at_SHMT2_5end | |||
|id=chr12:57625582..57625598,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.18e-11!679;CL:0000004!3.18e-11!679;CL:0000255!3.18e-11!679;CL:0000012!1.18e-10!682;CL:0000066!3.67e-08!254;CL:0002321!9.45e-08!248;CL:0000220!2.62e-07!246;CL:0000003!3.05e-07!722 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.00e-08!239;DOID:162!5.89e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:154;8.34e-07;2!DOID:4236;8.34e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,9.90e-07,2;DOID:4236,9.90e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p11@SHMT2 | |||
}} |
Revision as of 14:08, 11 January 2014
Short description: | p11@SHMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SHMT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 351bp_to_ENST00000555213_5end |
EntrezGene: | SHMT2 |
HGNC: | 10852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 9.90e-07 | 2 |
carcinosarcoma | 9.90e-07 | 2 |