FFCP PHASE1:Hg19::chr12:57881842..57881871,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6898 | |||
|TSSclassifier=strong | |||
|UniProt=A6NC17,F5H2V6,F8W0S4,F8VZZ9,F8W0M7,F8VPL7,F8VS26 | |||
|association_with_transcript=0bp_to_ENST00000315473,ENST00000447721,ENST00000545888,ENST00000546481,ENST00000547062,ENST00000547501,ENST00000548714,ENST00000549074,ENST00000551431,ENST00000551842,ENST00000551892,ENST00000552007,ENST00000553162_5end | |||
|description=CAGE_peak_1_at_MARS_5end | |||
|id=chr12:57881842..57881871,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.25e-20!679;CL:0000004!2.25e-20!679;CL:0000255!2.25e-20!679;CL:0000012!9.43e-20!682;CL:0000066!6.11e-14!254;CL:0000003!3.90e-12!722;CL:0000063!1.48e-10!578;CL:0000144!2.04e-10!625;CL:0000055!3.20e-09!180;CL:0002321!1.96e-08!248;CL:0000220!5.24e-08!246;CL:0002371!2.06e-07!591 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.14e-13,253;CL:0002321,1.12e-08,250;CL:0000223,9.76e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.78e-14!235;DOID:0050687!1.16e-13!143;DOID:14566!6.44e-13!239;DOID:305!1.29e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.78e-14,235;DOID:0050687,1.16e-13,143;DOID:14566,6.44e-13,239;DOID:305,1.29e-09,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=71.7629598118699,55.2379351638737,60.8923025694595,72.0527748142539,63.0215143142476,52.3403114460221,75.9899634504932,50.5375898741465,43.617999909373,69.051236156924,115.834993883423,87.3765488520689,85.1967339677905,19.8026164736075,24.1920084281379,44.3734596658172,43.9967005457503,48.930776055954,39.5225567020311,53.434539205326,76.5002592165949,119.73970360463,38.0693862884305,56.5291375551012,53.9833350257652,52.0375293143548,56.9778090782624,57.0653164524175,27.9288636562722,23.7974226820272,25.5446603471525,76.3119616317509,113.253425460622,244.03764671008,85.6787238418136,91.414816489412,31.7088474481635,18.281848481552,22.0598892217156,22.7861414251644,20.3763081558331,22.0247692892906,16.9999874638563,51.6163747667455,68.7734217513633,66.4680327654616,70.6584272193281,93.3351105809544,105.60987247523,105.870800374551,121.164014188265,82.7687804610048,61.3647311711181,50.3478053195384,47.3992703080196,41.2250723598304,88.9674049188577,77.3048786491091,90.6008321417872,115.534449747394,110.605322763234,50.4672489285676,85.3704454620584,65.2123868315022,124.209554133034,191.776205945605,199.303119678584,68.3396369498342,83.9587498656524,72.1066964420987,96.863920421339,140.313779311262,143.04099912328,30.2095059426077,26.1503288957004,27.4652825615972,22.915040753885,23.2774183904335,21.2157774440146,31.9214272990198,31.0310016430581,35.436845830339,29.9193615584249,30.0376236194172,19.5692035849982,23.4701622411579,24.0237592221607,25.2891073579973,20.4923910563307,27.6675588815256,28.4606484554724,34.0597569835145,34.0223173031454,38.3296852879175,42.0381422236152,32.6596265121096,28.7196264366196,25.5456995786957,36.1858638239136,27.7529582348526,35.5255270630614,39.2961678759829,29.2240092611867,28.7438978763748,36.236526619405,30.7932113471233,31.4132481967418,35.097021604835,36.6767360118857,37.9851559634492,29.0167518675141,27.2414900590949,25.2087157375503,25.9514603247022,22.9978152370949,29.0071917305769,37.9388288665902,36.7681366666414,30.3623630423403,26.7594948032241,30.6009223312517,26.6126572445545,21.6828171471993,25.4693356197293,21.2382235138988,30.0707110095901,26.2760959014735,23.7895957005184,30.7556225151033,30.4131248153878,41.4471672733735,30.1815386866636,99.6049356761101,81.685248438912,92.2461755570037,76.0444224544324,67.5993054993434,72.9952305453954,38.0029964999553,52.1064084037025,46.5524364173568,30.976551355209,101.638385433619,121.988081676077,32.779286759123,32.7363906122622,34.3031538138672,21.7026468117861,20.5918167880846,16.3441300585009,98.387391646519,67.0982984182777,56.2367612604303,41.8327877023767,57.890922196967,54.7484903460734,87.7778859454604,35.4030960061981,36.6439250567311,48.1997682381125,34.2404919542775,47.1368705545478,32.4602536539065,45.9578850432336,53.4693685601961,43.1317687612105,45.8039920157386,50.1121088150784,91.9899824795299,97.7743629355173,59.357365033452,21.0848667897701,27.1446184903828,90.7075628456471,92.4367830153292,82.9429851402997,87.125240975098,167.799423138056,63.4856404135059,91.3904488231961,144.111144235102,92.2536631080178,25.5193049027808,94.7016024649907,50.6731899651722,60.8456859132624,34.5705554687999,314.928004384623,38.7078495269597,81.5774704808562,48.7202698598871,101.6982758255,100.361225508242,74.8602799722984,40.4225259084689,58.4691350404016,83.7972085335458,71.2801714369232,104.346644155551,75.5433930408562,80.4852318834187,56.5609342885662,69.5658970488121,36.8495273593963,58.8230011980323,81.5257536825392,88.7906928137987,67.2652846138925,134.183447495269,93.1110215248954,74.8119611093253,139.542359679247,68.9421420605156,222.859067139469,79.844131366252,138.227816105597,82.431706366374,159.790579096524,89.1043018857458,60.9405634206921,124.608366973332,61.2572757224053,61.211373824086,40.9713008706189,45.5486021386694,36.1373790190145,111.727914814709,101.385272765936,105.387906182653,79.197046031743,98.9097735432463,92.7042492052608,76.6602708416098,43.0971428589233,69.0674606762403,30.1839153220786,25.9876613401051,47.7959472160969,54.4528548952268,43.8640074387937,55.9190441753237,53.1625843585471,50.7759124897747,43.2808499194128,43.9536081880775,43.4764287349421,42.8130163682296,92.5595707102742,53.9161954844134,61.7436587819276,43.0967118394225,93.3685855843745,64.9868897349544,81.6706733917104,78.9585775446789,49.7546649865724,48.5096261506125,219.183418852358,82.4337573775373,57.5900128886054,298.766215969568,114.392826380754,56.2892233898566,36.0543559472489,83.0079468247259,42.5881020895168,47.6875077953909,47.5635380586496,49.7828770714343,43.7827942668385,19.6973604869918,27.61250328643,30.7666505937667,44.0549019737852,42.6674605625103,46.218681701018,137.830566439684,87.4808154927025,100.06287926212,46.3103443622187,35.6596157753565,17.6228898209656,15.8531948758658,17.8001831131196,41.9721081271237,73.7237661327476,57.436549132923,65.007529488628,57.5833959138612,54.0617504119051,47.7330142493066,87.5743768737267,95.9112151433216,53.3169337918307,67.8676507728333,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| |||
|short_description=p1@MARS | |||
}} |
Revision as of 14:11, 11 January 2014
Short description: | p1@MARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000315473, ENST00000447721, ENST00000545888, ENST00000546481, ENST00000547062, ENST00000547501, ENST00000548714, ENST00000549074, ENST00000551431, ENST00000551842, ENST00000551892, ENST00000552007, ENST00000553162_5end |
EntrezGene: | MARS |
HGNC: | 6898 |
UniProt: | A6NC17F5H2V6F8W0S4F8VZZ9F8W0M7F8VPL7F8VS26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.14e-13 | 253 |
embryonic cell | 1.12e-08 | 250 |
endodermal cell | 9.76e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.78e-14 | 235 |
cell type cancer | 1.16e-13 | 143 |
disease of cellular proliferation | 6.44e-13 | 239 |
carcinoma | 1.29e-09 | 106 |