FFCP PHASE1:Hg19::chr13:73636334..73636351,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6349 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-354bp_to_ENST00000464404_5end | |||
|description=CAGE_peak_6_at_KLF5_5end | |||
|id=chr13:73636334..73636351,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.64e-17!43;CL:0000223!7.91e-14!59;CL:0000066!2.77e-13!254;CL:0002251!4.05e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002623;3.87e-17;3!CL:0002251;9.36e-13;20!CL:0000622;1.73e-10;5!CL:0002076;2.33e-10;42!CL:0000154;8.11e-09;6!CL:0002328;4.88e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.95e-17,3;CL:0002076,1.24e-13,42;CL:0002251,9.06e-13,20;CL:0000223,3.14e-11,58;CL:0000622,1.47e-10,5;CL:0000154,7.11e-09,6;CL:0002328,5.25e-08,3;CL:1001319,9.79e-07,1;CL:1000600,9.79e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.85e-15!106;DOID:0050687!8.92e-13!143;DOID:299!1.93e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.95e-12;2!DOID:1749;9.83e-10;14!DOID:3151;3.72e-07;1!DOID:3149;3.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.23e-12,2;DOID:1749,6.77e-10,14;DOID:3151,4.18e-07,1;DOID:3149,4.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.22e-16!169;UBERON:0000925!1.22e-16!169;UBERON:0006595!1.22e-16!169;UBERON:0001007!2.29e-14!155;UBERON:0001555!2.29e-14!155;UBERON:0007026!2.29e-14!155;UBERON:0004921!3.67e-11!129;UBERON:0004185!3.67e-11!129;UBERON:0000344!1.20e-09!12;UBERON:0000077!3.49e-09!130;UBERON:0000161!1.68e-08!35;UBERON:0002294!3.15e-08!7;UBERON:0001173!3.15e-08!7;UBERON:0004912!3.15e-08!7;UBERON:0001004!1.60e-07!72;UBERON:0003729!2.55e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;1.94e-15;6!UBERON:0000161;1.79e-13;19!UBERON:0000166;1.79e-13;19!UBERON:0003343;1.79e-13;4!UBERON:0004785;1.79e-13;4!UBERON:0000165;1.58e-11;28!UBERON:0001041;1.62e-09;14!UBERON:0001044;8.11e-09;6!UBERON:0003293;8.11e-09;6!UBERON:0003294;8.11e-09;6!UBERON:0010047;8.11e-09;6!UBERON:0003408;8.11e-09;6!UBERON:0000167;8.11e-09;6!UBERON:0002110;2.84e-08;3!UBERON:0004815;4.88e-08;3!UBERON:0002031;4.88e-08;3!UBERON:0004921;1.33e-07;33!UBERON:0002294;1.57e-07;7!UBERON:0001173;1.57e-07;7!UBERON:0000344;9.91e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,5.57e-15,22;UBERON:0000161,1.45e-13,36;UBERON:0003343,1.59e-13,4;UBERON:0004785,1.59e-13,4;UBERON:0000165,4.56e-11,29;UBERON:0000930,4.56e-11,29;UBERON:0001007,1.61e-10,145;UBERON:0001555,1.61e-10,145;UBERON:0007026,1.61e-10,145;UBERON:0004119,2.86e-10,160;UBERON:0000925,2.86e-10,160;UBERON:0006595,2.86e-10,160;UBERON:0000974,2.62e-09,10;UBERON:0001044,7.11e-09,6;UBERON:0003293,7.11e-09,6;UBERON:0003294,7.11e-09,6;UBERON:0010047,7.11e-09,6;UBERON:0000167,7.11e-09,6;UBERON:0002110,2.74e-08,3;UBERON:0006242,2.74e-08,3;UBERON:0001004,3.19e-08,74;UBERON:0004815,5.25e-08,3;UBERON:0002031,5.25e-08,3;UBERON:0004921,4.97e-07,118;UBERON:0000997,8.75e-07,1;UBERON:0005056,8.75e-07,1;UBERON:0004645,9.79e-07,1;UBERON:0001256,9.79e-07,1;UBERON:0001259,9.79e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,1.83884244895785,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.860919069801795,0,0.219500570817251,0,0.100528972411631,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909658919938,0.290633938513962,0,0,0,0.207328115540772,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.802025881213139,2.30202472339741,0,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,1.15699440752685,0.768760269460425,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,0,0.0941438007767792,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0.47748896947538,0.296964680832639,0.614321404198464,0,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,1.43216939740487,0,0.789147245095469,0,0,0,0,0,0,0,0.724999575434793,0.568967241427498,0.762760950878299,0,0,0,0,0,0.120596438625408,0,0,0,0,0,6.97118721393016,0.615602068030377,0.341826167541004,0,0.179515288819544,0.217294743844016,0.638002319463839,0.183195186803725,3.19820865611181,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,1.32686346755009,0.611030144933625,0.593042257361244,0,0,0,0,0,0,0.586993856796269,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,1.66587075604442,0.34823682632161,0,0,0.677294319023596,0.730893170861856,0.410577285266046,1.84279131327997,0.0882561266915003,1.58186518546373,0.137041924646751,0,0,2.93327074102205,0.240476460754601,1.28071796843612,0,0.576361668616424,0,0,0.720273989940749,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,3.01891218839339,0.0788057072991982,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0.521988583930423,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.491545817507439,0.633936370075881,0,0,0.344429959321631,0,0,1.39879507719444,1.24415452006595,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,2.64998839952769,3.53909170043221,2.38457178078183,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0.887136517302272,0,0,0,0,0,0,0.992422356778588,0.351742488719241,0.255524855279191,0,0,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0.333694205676207,0.078493092850514,0,1.40136081656895,0,0.215927591218621,0,0.0714765441766563,0,0,0.173858272302579,0,1.24329698497822,1.87790324803345,5.53007729451273,0,0,0,0.846774100381858,0.22910686854405,0.31020638566432,0,0.559277158988962,1.17780280338292,3.41370189950354,0,0.102662806856247,1.1598144313382,0.971421986118279,0,0,0,0.11294608203896,0,0,0.617393264863557,0.655678681511872,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,1.96409332466223,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0.18378979906969,0,0.151557396436479,0.267964130156178,0,0,2.34557380091079,0.714193294391221,0,0,0.224263725161227,0.0636471582781649,0.202117188958219,2.39488422686657,0,1.01028079521881,1.36272190246085,0.332660356546013,1.54666210360852,0.213454691755431,0,3.23370727583713,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p6@KLF5 | |||
}} |
Revision as of 18:01, 11 January 2014
Short description: | p6@KLF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KLF5_5end |
Coexpression cluster: | NA |
Association with transcript: | -354bp_to_ENST00000464404_5end |
EntrezGene: | KLF5 |
HGNC: | 6349 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.95e-17 | 3 |
endo-epithelial cell | 1.24e-13 | 42 |
epithelial cell of alimentary canal | 9.06e-13 | 20 |
endodermal cell | 3.14e-11 | 58 |
acinar cell | 1.47e-10 | 5 |
protein secreting cell | 7.11e-09 | 6 |
bronchial epithelial cell | 5.25e-08 | 3 |
bladder cell | 9.79e-07 | 1 |
lower urinary tract cell | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
oral opening | 5.57e-15 | 22 |
orifice | 1.45e-13 | 36 |
mucosa of oral region | 1.59e-13 | 4 |
respiratory system mucosa | 1.59e-13 | 4 |
mouth | 4.56e-11 | 29 |
stomodeum | 4.56e-11 | 29 |
digestive system | 1.61e-10 | 145 |
digestive tract | 1.61e-10 | 145 |
primitive gut | 1.61e-10 | 145 |
endoderm-derived structure | 2.86e-10 | 160 |
endoderm | 2.86e-10 | 160 |
presumptive endoderm | 2.86e-10 | 160 |
neck | 2.62e-09 | 10 |
saliva-secreting gland | 7.11e-09 | 6 |
gland of oral region | 7.11e-09 | 6 |
gland of foregut | 7.11e-09 | 6 |
oral gland | 7.11e-09 | 6 |
oral cavity | 7.11e-09 | 6 |
gallbladder | 2.74e-08 | 3 |
gall bladder primordium | 2.74e-08 | 3 |
respiratory system | 3.19e-08 | 74 |
lower respiratory tract epithelium | 5.25e-08 | 3 |
epithelium of bronchus | 5.25e-08 | 3 |
subdivision of digestive tract | 4.97e-07 | 118 |
mammalian vulva | 8.75e-07 | 1 |
external female genitalia | 8.75e-07 | 1 |
urinary bladder urothelium | 9.79e-07 | 1 |
wall of urinary bladder | 9.79e-07 | 1 |
mucosa of urinary bladder | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.23e-12 | 2 |
squamous cell carcinoma | 6.77e-10 | 14 |
skin squamous cell carcinoma | 4.18e-07 | 1 |
keratoacanthoma | 4.18e-07 | 1 |