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FFCP PHASE1:Hg19::chr15:39874801..39874813,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C142|description=CAGE_peak_at_chr15:39874801..39874813,+|id=chr15:39874801..39874813,+|ontology_enrichment_celltype=CL:0000055!1.70e-18!180;CL:0000057!4.05e-15!75;CL:0002371!5.13e-15!591;CL:0000144!1.50e-12!625;CL:0000548!1.08e-10!679;CL:0000004!1.08e-10!679;CL:0000255!1.08e-10!679;CL:0000222!1.97e-10!119;CL:0000012!2.60e-10!682;CL:0002139!1.55e-09!24;CL:0000115!3.05e-09!35;CL:0002334!5.92e-09!12;CL:0000359!1.11e-07!32;CL:0000192!2.25e-07!42;CL:0000514!2.25e-07!42;CL:0000220!3.46e-07!246;CL:0002321!3.66e-07!248;CL:0000723!6.70e-07!436;CL:0000680!7.81e-07!57;CL:0000056!7.81e-07!57;CL:0000355!7.81e-07!57|ontology_enrichment_celltype_v019=CL:0002139;1.08e-10;24!CL:0002620;2.77e-10;23!CL:0000115;8.20e-10;36!CL:0002334;8.18e-09;12!CL:0000057;1.48e-07;73!CL:0000071;4.32e-07;18|ontology_enrichment_celltype_v019_2=CL:0000057,6.37e-17,76;CL:0002139,1.03e-10,24;CL:0000115,1.21e-10,36;CL:0002620,3.19e-10,23;CL:0002334,6.26e-09,12;CL:0002078,1.25e-07,45;CL:0000071,3.62e-07,18;CL:0002546,3.62e-07,18;CL:0000048,5.32e-07,427;CL:0002580,7.66e-07,3|ontology_enrichment_development_v019=CL:0002546;4.32e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.01e-09;5!DOID:450;2.01e-09;5!DOID:66;2.01e-09;5!DOID:423;2.01e-09;5!DOID:0080000;2.01e-09;5!DOID:11722;2.01e-09;5|ontology_enrichment_disease_v019_2=DOID:17,2.27e-09,5;DOID:450,2.27e-09,5;DOID:66,2.27e-09,5;DOID:423,2.27e-09,5;DOID:0080000,2.27e-09,5;DOID:11722,2.27e-09,5|ontology_enrichment_uberon=UBERON:0004872!1.93e-14!84;UBERON:0002049!1.48e-13!79;UBERON:0007798!1.48e-13!79;UBERON:0000055!1.72e-13!69;UBERON:0004535!5.19e-13!110;UBERON:0001009!1.40e-12!113;UBERON:0001981!7.55e-12!60;UBERON:0007500!7.55e-12!60;UBERON:0004537!7.55e-12!60;UBERON:0006965!7.55e-12!60;UBERON:0003914!1.66e-11!118;UBERON:0001637!2.54e-10!42;UBERON:0003509!2.54e-10!42;UBERON:0004572!2.54e-10!42;UBERON:0000468!2.72e-09!659;UBERON:0000467!1.86e-08!625;UBERON:0000490!2.14e-08!138;UBERON:0000480!2.42e-08!626;UBERON:0004573!4.25e-08!33;UBERON:0004571!4.25e-08!33;UBERON:0003081!1.27e-07!216;UBERON:0000914!2.11e-07!83;UBERON:0002329!2.11e-07!83;UBERON:0003077!2.11e-07!83;UBERON:0003059!2.11e-07!83;UBERON:0007282!2.11e-07!83;UBERON:0009618!2.11e-07!83;UBERON:0007285!2.11e-07!83;UBERON:0000926!4.19e-07!448;UBERON:0004120!4.19e-07!448;UBERON:0006603!4.19e-07!448;UBERON:0002100!4.45e-07!216;UBERON:0005256!8.87e-07!143|ontology_enrichment_uberon_v019=UBERON:0003688;5.37e-11;6!UBERON:0002358;5.37e-11;6!UBERON:0003684;5.37e-11;6!UBERON:0001178;5.37e-11;6!UBERON:0001637;3.66e-10;42!UBERON:0003509;3.66e-10;42!UBERON:0004572;3.66e-10;42!UBERON:0004573;8.15e-10;33!UBERON:0004571;8.15e-10;33!UBERON:0000055;3.10e-08;65!UBERON:0000947;1.29e-07;21!UBERON:0010191;1.29e-07;21!UBERON:0007500;1.45e-07;56!UBERON:0001981;1.45e-07;56!UBERON:0004537;1.45e-07;56!UBERON:0004638;4.32e-07;18!UBERON:0001986;4.32e-07;18!UBERON:0004852;4.32e-07;18!UBERON:0004457;5.08e-07;9!UBERON:0000042;5.08e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.61e-14,68;UBERON:0001637,4.57e-12,42;UBERON:0003509,4.57e-12,42;UBERON:0004572,4.57e-12,42;UBERON:0007500,7.33e-12,59;UBERON:0001981,7.33e-12,59;UBERON:0004537,7.33e-12,59;UBERON:0006965,7.33e-12,59;UBERON:0002049,3.66e-11,78;UBERON:0007798,3.66e-11,78;UBERON:0003688,6.75e-11,6;UBERON:0002358,6.75e-11,6;UBERON:0003684,6.75e-11,6;UBERON:0001178,6.75e-11,6;UBERON:0004573,1.31e-10,33;UBERON:0004571,1.31e-10,33;UBERON:0004872,6.10e-09,83;UBERON:0002097,2.55e-08,41;UBERON:0004535,6.08e-08,109;UBERON:0000947,9.33e-08,21;UBERON:0010191,9.33e-08,21;UBERON:0001009,1.60e-07,112;UBERON:0004638,3.62e-07,18;UBERON:0001986,3.62e-07,18;UBERON:0004852,3.62e-07,18;UBERON:0002199,5.76e-07,46;UBERON:0002416,5.76e-07,46;UBERON:0000487,9.73e-07,22|phase1_expression=3.08853244759946,6.42301571672949,2.11431606143957,10.007329835313,1.34088328328186,8.72338524100369,0,0,0,0.245733936501509,1.39560233594486,0.655324116390517,1.31883489114227,0,0.662794751455832,2.6893005858071,1.20538905604795,2.19093027116212,2.43966399395253,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,1.80490002723128,0,0,0,0,0.145398238779565,0,0.242584061187816,1.39457422143411,0.411167888021826,0,2.58923153089935,0.256160706529101,0,2.41321976515633,0,1.35426486594342,1.50593871634084,0,0,3.06083892370903,0.320929027076094,0,0.989553900560148,0.199463657621632,0.852449501065388,3.77272010217159,0,0,2.51248665256743,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.724232594804119,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,1.38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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C142
|description=CAGE_peak_at_chr15:39874801..39874813,+
|id=chr15:39874801..39874813,+
|ontology_enrichment_celltype=CL:0000055!1.70e-18!180;CL:0000057!4.05e-15!75;CL:0002371!5.13e-15!591;CL:0000144!1.50e-12!625;CL:0000548!1.08e-10!679;CL:0000004!1.08e-10!679;CL:0000255!1.08e-10!679;CL:0000222!1.97e-10!119;CL:0000012!2.60e-10!682;CL:0002139!1.55e-09!24;CL:0000115!3.05e-09!35;CL:0002334!5.92e-09!12;CL:0000359!1.11e-07!32;CL:0000192!2.25e-07!42;CL:0000514!2.25e-07!42;CL:0000220!3.46e-07!246;CL:0002321!3.66e-07!248;CL:0000723!6.70e-07!436;CL:0000680!7.81e-07!57;CL:0000056!7.81e-07!57;CL:0000355!7.81e-07!57
|ontology_enrichment_celltype_v019=CL:0002139;1.08e-10;24!CL:0002620;2.77e-10;23!CL:0000115;8.20e-10;36!CL:0002334;8.18e-09;12!CL:0000057;1.48e-07;73!CL:0000071;4.32e-07;18
|ontology_enrichment_celltype_v019_2=CL:0000057,6.37e-17,76;CL:0002139,1.03e-10,24;CL:0000115,1.21e-10,36;CL:0002620,3.19e-10,23;CL:0002334,6.26e-09,12;CL:0002078,1.25e-07,45;CL:0000071,3.62e-07,18;CL:0002546,3.62e-07,18;CL:0000048,5.32e-07,427;CL:0002580,7.66e-07,3
|ontology_enrichment_development_v019=CL:0002546;4.32e-07;18
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:17;2.01e-09;5!DOID:450;2.01e-09;5!DOID:66;2.01e-09;5!DOID:423;2.01e-09;5!DOID:0080000;2.01e-09;5!DOID:11722;2.01e-09;5
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|ontology_enrichment_uberon=UBERON:0004872!1.93e-14!84;UBERON:0002049!1.48e-13!79;UBERON:0007798!1.48e-13!79;UBERON:0000055!1.72e-13!69;UBERON:0004535!5.19e-13!110;UBERON:0001009!1.40e-12!113;UBERON:0001981!7.55e-12!60;UBERON:0007500!7.55e-12!60;UBERON:0004537!7.55e-12!60;UBERON:0006965!7.55e-12!60;UBERON:0003914!1.66e-11!118;UBERON:0001637!2.54e-10!42;UBERON:0003509!2.54e-10!42;UBERON:0004572!2.54e-10!42;UBERON:0000468!2.72e-09!659;UBERON:0000467!1.86e-08!625;UBERON:0000490!2.14e-08!138;UBERON:0000480!2.42e-08!626;UBERON:0004573!4.25e-08!33;UBERON:0004571!4.25e-08!33;UBERON:0003081!1.27e-07!216;UBERON:0000914!2.11e-07!83;UBERON:0002329!2.11e-07!83;UBERON:0003077!2.11e-07!83;UBERON:0003059!2.11e-07!83;UBERON:0007282!2.11e-07!83;UBERON:0009618!2.11e-07!83;UBERON:0007285!2.11e-07!83;UBERON:0000926!4.19e-07!448;UBERON:0004120!4.19e-07!448;UBERON:0006603!4.19e-07!448;UBERON:0002100!4.45e-07!216;UBERON:0005256!8.87e-07!143
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|short_description=p@chr15:39874801..39874813,+
}}

Revision as of 22:53, 11 January 2014

Short description:p@chr15:39874801..39874813, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr15:39874801..39874813, +
Coexpression cluster:C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data