FFCP PHASE1:Hg19::chr15:55562387..55562396,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5873 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9766 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=85bp_to_uc002aco.2_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_10_at_RAB27A_5end | |||
|id=chr15:55562387..55562396,- | |||
|ontology_enrichment_celltype=CL:0000148!1.13e-25!10;CL:0000541!1.13e-25!10;CL:0000147!4.61e-18!14;CL:0002567!6.46e-17!3;CL:0000710!7.26e-16!20;CL:0000075!2.33e-14!27;CL:0002077!4.20e-09!33;CL:0000325!1.54e-07!39;CL:0002566!8.34e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000148;6.02e-101;10!CL:0002567;3.03e-84;3!CL:0000147;2.65e-72;14!CL:0000710;8.47e-51;20!CL:0000075;9.04e-38;27!CL:0002566;1.33e-29;1!CL:0002077;3.89e-28;34!CL:0000149;2.11e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.02e-101,10;CL:0000541,6.02e-101,10;CL:0002567,3.03e-84,3;CL:0000147,2.65e-72,14;CL:0000710,8.47e-51,20;CL:0000075,9.04e-38,27;CL:0002077,4.29e-30,34;CL:0002566,1.33e-29,1;CL:0000333,6.92e-24,41;CL:0000133,6.05e-17,59;CL:0000221,5.08e-14,72;CL:0000149,2.11e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;3.85e-10;59!CL:0000221;4.53e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!1.06e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.05e-15,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.30225784359944,1.52795370223311,14.0660936652056,1.71072446022705,0.514137463516618,6.60754727256618,17.1495859578347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,2.85465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@RAB27A | |||
}} |
Revision as of 23:40, 11 January 2014
Short description: | p10@RAB27A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RAB27A_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 85bp_to_uc002aco.2_5end |
EntrezGene: | RAB27A |
HGNC: | 9766 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.02e-101 | 10 |
melanoblast | 6.02e-101 | 10 |
light melanocyte | 3.03e-84 | 3 |
pigment cell | 2.65e-72 | 14 |
neurecto-epithelial cell | 8.47e-51 | 20 |
columnar/cuboidal epithelial cell | 9.04e-38 | 27 |
ecto-epithelial cell | 4.29e-30 | 34 |
dark melanocyte | 1.33e-29 | 1 |
migratory neural crest cell | 6.92e-24 | 41 |
neurectodermal cell | 6.05e-17 | 59 |
ectodermal cell | 5.08e-14 | 72 |
visual pigment cell | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.05e-15 | 2 |