FFCP PHASE1:Hg19::chr15:55611128..55611179,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9488 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8959 | |||
|TSSclassifier=strong | |||
|UniProt=Q92521,F5H1S1 | |||
|association_with_transcript=0bp_to_ENST00000164305,ENST00000539642,NM_004855,uc002act.2,uc010ugg.1_5end | |||
|coexpression_cluster_id=C777 | |||
|description=CAGE_peak_2_at_PIGB_5end | |||
|id=chr15:55611128..55611179,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.13e-17!52;CL:0000542!7.85e-17!53;CL:0000051!7.85e-17!53;CL:0000037!1.07e-11!172;CL:0000566!1.07e-11!172;CL:0000738!1.72e-11!140;CL:0000084!2.47e-11!25;CL:0000827!2.47e-11!25;CL:0000988!9.31e-11!182;CL:0000791!2.04e-10!18;CL:0000789!2.04e-10!18;CL:0002420!2.04e-10!18;CL:0002419!2.04e-10!18;CL:0000790!2.04e-10!18;CL:0002032!3.29e-10!165;CL:0000837!3.29e-10!165;CL:0002087!4.81e-09!119;CL:0000625!1.31e-07!11;CL:0002031!1.58e-07!124;CL:0000003!2.11e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.81e-12;25!CL:0000791;5.01e-11;18!CL:0000789;5.01e-11;18!CL:0002419;5.01e-11;18!CL:0000542;7.50e-11;53!CL:0000625;6.91e-08;11!CL:0000236;6.79e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.79e-17,52;CL:0000542,5.33e-17,53;CL:0000051,5.33e-17,53;CL:0000084,1.93e-11,25;CL:0000827,1.93e-11,25;CL:0000037,1.02e-10,168;CL:0000791,1.63e-10,18;CL:0000789,1.63e-10,18;CL:0002420,1.63e-10,18;CL:0002419,1.63e-10,18;CL:0000790,1.63e-10,18;CL:0000738,1.72e-10,136;CL:0000988,4.00e-10,177;CL:0002032,2.82e-09,161;CL:0000837,2.82e-09,161;CL:0002087,4.02e-08,115;CL:0000625,1.12e-07,11;CL:0000236,8.95e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;5.01e-11;18!CL:0000051;7.50e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.59e-09!15;UBERON:0000179!3.59e-09!15;UBERON:0000463!3.59e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.49e-09;15!UBERON:0000179;1.49e-09;15!UBERON:0000463;1.49e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.96e-09,15;UBERON:0000179,2.96e-09,15;UBERON:0000463,2.96e-09,15 | |||
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| |||
|short_description=p2@PIGB | |||
}} |
Revision as of 23:41, 11 January 2014
Short description: | p2@PIGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PIGB_5end |
Coexpression cluster: | C777_Neutrophils_Eosinophils_CD19_CD4_CD8_Whole_Natural |
Association with transcript: | 0bp_to_ENST00000164305, ENST00000539642, NM_004855, uc002act.2, uc010ugg.1_5end |
EntrezGene: | PIGB |
HGNC: | 8959 |
UniProt: | Q92521F5H1S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.79e-17 | 52 |
lymphocyte | 5.33e-17 | 53 |
common lymphoid progenitor | 5.33e-17 | 53 |
T cell | 1.93e-11 | 25 |
pro-T cell | 1.93e-11 | 25 |
hematopoietic stem cell | 1.02e-10 | 168 |
mature alpha-beta T cell | 1.63e-10 | 18 |
alpha-beta T cell | 1.63e-10 | 18 |
immature T cell | 1.63e-10 | 18 |
mature T cell | 1.63e-10 | 18 |
immature alpha-beta T cell | 1.63e-10 | 18 |
leukocyte | 1.72e-10 | 136 |
hematopoietic cell | 4.00e-10 | 177 |
hematopoietic oligopotent progenitor cell | 2.82e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.82e-09 | 161 |
nongranular leukocyte | 4.02e-08 | 115 |
CD8-positive, alpha-beta T cell | 1.12e-07 | 11 |
B cell | 8.95e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 2.96e-09 | 15 |
haemolymphatic fluid | 2.96e-09 | 15 |
organism substance | 2.96e-09 | 15 |