FFCP PHASE1:Hg19::chr15:68724518..68724531,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6136 | |||
|TSSclassifier=strong | |||
|UniProt=F5H1A1 | |||
|association_with_transcript=-16bp_to_ENST00000537153_5end | |||
|coexpression_cluster_id=C836 | |||
|description=CAGE_peak_2_at_ITGA11_5end | |||
|id=chr15:68724518..68724531,- | |||
|ontology_enrichment_celltype=CL:0000055!6.84e-33!180;CL:0000057!1.20e-22!75;CL:0000183!1.04e-08!59;CL:0000680!3.86e-08!57;CL:0000056!3.86e-08!57;CL:0000355!3.86e-08!57;CL:0002620!5.48e-08!23;CL:0002334!8.44e-08!12;CL:0000048!1.64e-07!430;CL:0000192!1.99e-07!42;CL:0000514!1.99e-07!42;CL:0000187!2.33e-07!54;CL:0000327!7.93e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000057;8.08e-10;73!CL:0002334;9.38e-10;12!CL:0000327;4.63e-09;15!CL:0002620;4.96e-09;23!CL:0002320;1.01e-07;188!CL:0000499;4.78e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.45e-26,76;CL:0000048,6.17e-11,427;CL:0000723,3.20e-10,433;CL:0002334,7.81e-10,12;CL:0000034,2.58e-09,441;CL:0000327,4.66e-09,15;CL:0002620,5.32e-09,23;CL:0002320,2.00e-07,361;CL:0000499,4.93e-07,28;CL:0000134,7.25e-07,354;CL:0000219,7.97e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.31e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.40e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.35e-08!63;UBERON:0001015!1.35e-08!63;UBERON:0000383!1.35e-08!63;UBERON:0002049!2.53e-08!79;UBERON:0007798!2.53e-08!79;UBERON:0001134!2.81e-08!61;UBERON:0002036!2.81e-08!61;UBERON:0003082!2.81e-08!61;UBERON:0004290!3.23e-08!70;UBERON:0004872!7.14e-08!84;UBERON:0000914!1.02e-07!83;UBERON:0002329!1.02e-07!83;UBERON:0003077!1.02e-07!83;UBERON:0003059!1.02e-07!83;UBERON:0007282!1.02e-07!83;UBERON:0009618!1.02e-07!83;UBERON:0007285!1.02e-07!83;UBERON:0000475!5.02e-07!365;UBERON:0001009!7.24e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.78e-08;198!UBERON:0004457;4.54e-08;9!UBERON:0000042;4.54e-08;9!UBERON:0003688;1.24e-07;6!UBERON:0002358;1.24e-07;6!UBERON:0003684;1.24e-07;6!UBERON:0001178;1.24e-07;6!UBERON:0000948;2.75e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.47e-08,371;UBERON:0000948,7.94e-08,24;UBERON:0005498,7.94e-08,24;UBERON:0004140,7.94e-08,24;UBERON:0009881,7.94e-08,24;UBERON:0004141,7.94e-08,24;UBERON:0003084,7.94e-08,24;UBERON:0007005,7.94e-08,24;UBERON:0004139,7.94e-08,24;UBERON:0004291,7.94e-08,24;UBERON:0003688,1.27e-07,6;UBERON:0002358,1.27e-07,6;UBERON:0003684,1.27e-07,6;UBERON:0001178,1.27e-07,6 | |||
|phase1_expression=16.5327325136207,18.8408461024065,19.0288445529561,39.0285863577209,23.241976910219,17.4467704820074,15.1979926900986,0.631719873426831,0,0,0,0,0,0.247532705920093,0,1.34465029290355,3.01347264011988,0,2.92759679274304,3.81675280038043,3.67201244239655,16.6131002383387,0.572471974262113,0.273748850145768,3.76627918784408,0.152826811495903,0.328402357799783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,12.2889311810753,24.0642197105227,18.105814870103,15.1104329939709,34.0644409211845,0.0945348171640679,0.221729397462564,0.43917392846563,3.47094550068939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55050055501597,0.35576626268671,0.66944122552934,1.20848795132744,1.52054421143703,1.46437234528902,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0,37.2728963771489,3.41902381494365,8.34177839123278,25.8152958673932,4.61068896857864,10.6528744027038,7.47242970107935,32.313448842648,4.35695449559673,3.77189881795127,4.41347138406339,9.38416051398575,5.76175924479999,1.64025002283658,0,0,0.149448680551801,1.17434498643765,0.485618833104395,1.40450806702248,0,0.859840221182376,0,14.2560342873846,12.857880322485,0.910161361938026,1.43723628363248,0.505008341862199,0.125118519871964,0,8.77955241761676,8.58165828237255,17.7280909509784,1.36118619792025,11.8397159554649,23.2777553812239,18.0142115985628,21.3064678219926,13.9120914471893,22.4147269839697,30.1509307257176,32.5738321225644,23.7746292593325,10.0973509697646,23.8409237483555,3.55621325001386,34.080920881595,11.5864912961786,4.57813599238317,0,0,0,0,0,0.116193942869518,0,0,0,0,19.9404690839794,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,4.115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,3.58389135841357,3.11980435583874,0,0.34779121492523,6.45747818297019,0.866198686566443,0.925971025153221,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,3.7003257833969,3.48768055066624,3.2268845761218,11.7637261339578,0,0,14.6265964121679,7.28052058379563,0.514414748524284,0,0.799266537048298,3.57444984145369,0.542621605391443,0.823240336780769,0.65147236858747,2.84313558994037,0.791951872933429,6.02878754119172,10.4584015032035,0.899756920638513,0,0,0,17.9718641618687,24.1210065251639,0,2.17171960001369,1.64381058040307,3.04403637507822,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,1.00034104211935,1.62759014219841,11.2304265226636,11.7763132606127,19.7128018792418,18.0397779088778,25.2794723771284,25.0148254461583,18.6251528326509,15.9414143648505,14.933902651878,0.434418072340414,15.6640925970192,10.9805895619474,0,0,0,0,0,1.5119514666484,37.2161711728165,63.5332569412579,49.9574968090871,33.5724571049937,63.9634061333379,51.4732547659544,16.325987308949,1.85051632563187,4.26148140751505,1.64254312027618,1.03850885836724,1.51073491997947,0,0,0,3.55924789310281,0.182091168006717,2.36023946926963,0,0,0,1.46139224653261,0.949964660035881,1.13733384070897,0.510281115829547,0.863663664408557,0,1.35473218771926,2.00675909541941,0,0,0,0,0,0,0,0,0.206082023295445,1.37354197227515,0.82509499920588,0.574265537996172,0,8.03419649220798,8.60369392799886,0,0.460511024178389,1.65403886981437,0.429680979473094,0.580066775656914,1.61930592090592,15.1354460599453,0,0,0,0.10115778085555,0.464845549297286,25.1849877464512,1.3940745403212,0.616067160352178,0.532306030317022,0,1.29726953372744,2.71937284809783,7.81532575655301,9.8077621662805,2.85945290885737,1.02359116524534,0,2.54562598340749,0.78494864019923,3.05783177891635,2.47083326762449,3.53437207037059,1.2130948894399,1.58510321173008,4.21258456238981,1.46290121726877,0.731140468893853,0,0.9554993798559,9.75697480480618,2.26016233240486,2.2054613741845,1.99031692572366,0.876901770507525,2.89387767133344,0,3.65238678532867,0,0.563391205064483,0.860468113224309,1.67023369722306,6.06340787518125,0,24.6995933298267,15.4768599691154,1.13841952129715,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,6.45590489132854,0,0,22.7142706606219,1.10513566212459,0,6.3406583151336,0,12.7526230941341,0,0,0,1.57829449019094,0,12.2250689159101,0,0.371072392647405,0,0,0,0,0,0,0,0,0,1.04174996959975,0,0.120596438625408,0,0,0,1.09692698576986,0,0,10.9269367075392,14.6985252042632,0,0,0,0,4.21348929648567,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0.404406797884062,2.40773294189637,0,0,0,0,1.18375320854817,2.41981432097328,0.30607276163049,3.34888872030986,0,0,1.99396161812156,0.992975867626496,0.627865836814451,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| |||
|short_description=p2@ITGA11 | |||
}} |
Revision as of 00:16, 12 January 2014
Short description: | p2@ITGA11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGA11_5end |
Coexpression cluster: | C836_Preadipocyte_osteoclastoma_Ewing_Fibroblast_Adipocyte_Osteoblast_hepatic |
Association with transcript: | -16bp_to_ENST00000537153_5end |
EntrezGene: | ITGA11 |
HGNC: | 6136 |
UniProt: | F5H1A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.45e-26 | 76 |
multi fate stem cell | 6.17e-11 | 427 |
somatic stem cell | 3.20e-10 | 433 |
preadipocyte | 7.81e-10 | 12 |
stem cell | 2.58e-09 | 441 |
extracellular matrix secreting cell | 4.66e-09 | 15 |
skin fibroblast | 5.32e-09 | 23 |
connective tissue cell | 2.00e-07 | 361 |
stromal cell | 4.93e-07 | 28 |
mesenchymal cell | 7.25e-07 | 354 |
motile cell | 7.97e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.47e-08 | 371 |
heart | 7.94e-08 | 24 |
primitive heart tube | 7.94e-08 | 24 |
primary heart field | 7.94e-08 | 24 |
anterior lateral plate mesoderm | 7.94e-08 | 24 |
heart tube | 7.94e-08 | 24 |
heart primordium | 7.94e-08 | 24 |
cardiac mesoderm | 7.94e-08 | 24 |
cardiogenic plate | 7.94e-08 | 24 |
heart rudiment | 7.94e-08 | 24 |
omentum | 1.27e-07 | 6 |
peritoneum | 1.27e-07 | 6 |
abdominal cavity | 1.27e-07 | 6 |
visceral peritoneum | 1.27e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.40e-07 | 14 |