FFCP PHASE1:Hg19::chr15:79296506..79296528,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3519 | |||
|description=CAGE_peak_at_chr15:79296506..79296528,- | |||
|id=chr15:79296506..79296528,- | |||
|ontology_enrichment_celltype=CL:0000188!4.35e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002554;3.46e-11;2!CL:1001319;6.95e-07;1!CL:1000600;6.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,2.41e-11,2;CL:0000066,1.89e-07,253;CL:1001319,6.59e-07,1;CL:1000600,6.59e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.33e-08!235;DOID:14566!4.49e-08!239;DOID:1749!2.64e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.06e-18;14!DOID:1909;9.81e-12;2!DOID:3112;8.66e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.07e-18,14;DOID:1909,1.04e-11,2;DOID:305,1.23e-10,106;DOID:162,2.10e-10,235;DOID:0050687,2.89e-10,143;DOID:14566,4.54e-10,239;DOID:3112,8.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000033!3.99e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;3.56e-07;7!UBERON:0001173;3.56e-07;7!UBERON:0004645;6.95e-07;1!UBERON:0001256;6.95e-07;1!UBERON:0001259;6.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,2.57e-09,9;UBERON:0001173,2.57e-09,9;UBERON:0004912,2.57e-09,9;UBERON:0002394,3.10e-08,6;UBERON:0003928,3.10e-08,6;UBERON:0004645,6.59e-07,1;UBERON:0001256,6.59e-07,1;UBERON:0001259,6.59e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.443458794925128,0.527008714158756,0.0654895377488563,0.728590576585084,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0.570471821544449,0,0,0,0,0,0.245668634623536,0,0,0,1.82032272387605,2.15585442544872,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0,0.560655421726804,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.429680979473094,0,0.0852266274161009,0.0890320356467374,0,1.15314040419064,1.40373983744043,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0.324621940274555,0.561594356226918,0.228234679033192,0.47003968731907,0,0,0.321176150207399,0.201799707191048,0,0,0.614481528616916,0.894704431569664,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,11.0450177102327,0.123084805461069,0,3.86433909933505,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,1.2558420511602,0,0,0,0.167821586975843,0,0,0,1.63232808159148,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5277263069176,14.4518282923468,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0,0,2.00397050628834,0,0.999048047910651,0,0,0,0,1.98804056904692,0.471388069233591,0.951329442515298,0.732219924186332,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,4.79787993298613,0,0,0,0,0,0,3.59190574687462,0,0.170388021785422,1.35974509824151,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,6.38341257770182,0,0,0,0,0,0.886068179966986,0.366078794705889,0.1251909307065,0,0,0.0620964029413835,0,1.74972571146949,4.24617529116614,4.28198000317451,2.58792401667989,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0,0,0.796191777397232,0,0,0,1.26184898228651,0,0,0.521988583930423,0.226705925512272,1.85217979459067,0.244736704506468,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0,0,0,10.0273785538536,0.138258436151731,0,0,0,0.655219697692825,0,1.05656061679314,0.19998739585493,1.06691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,0,0.0981477185010256,0,12.1062875024308,8.89547629357604,0,2.0710797781803,0,0,0.20170506870352,0,0,6.55087670040387,1.6264169483875,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,10.093231783528,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0.308696632431779,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.580120991762195,0.0999411559249289,0.178553938605658,5.29342307573538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,6.05512057935313,0,0,0,0,0,0.0717222053926763,0,10.1754085763718,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr15:79296506..79296528,- | |||
}} |
Revision as of 00:46, 12 January 2014
Short description: | p@chr15:79296506..79296528, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:79296506..79296528, - |
Coexpression cluster: | C3519_epidermoid_oral_transitionalcell_astrocytoma_malignant_pharyngeal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 2.41e-11 | 2 |
epithelial cell | 1.89e-07 | 253 |
bladder cell | 6.59e-07 | 1 |
lower urinary tract cell | 6.59e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
biliary system | 2.57e-09 | 9 |
biliary tree | 2.57e-09 | 9 |
biliary bud | 2.57e-09 | 9 |
bile duct | 3.10e-08 | 6 |
digestive system duct | 3.10e-08 | 6 |
urinary bladder urothelium | 6.59e-07 | 1 |
wall of urinary bladder | 6.59e-07 | 1 |
mucosa of urinary bladder | 6.59e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.07e-18 | 14 |
melanoma | 1.04e-11 | 2 |
carcinoma | 1.23e-10 | 106 |
cancer | 2.10e-10 | 235 |
cell type cancer | 2.89e-10 | 143 |
disease of cellular proliferation | 4.54e-10 | 239 |
papillary adenocarcinoma | 8.21e-07 | 1 |