FFCP PHASE1:Hg19::chr17:48265259..48265297,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48265259..48265297,+ | |||
|id=chr17:48265259..48265297,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.79e-26!180;CL:0000057!1.25e-20!75;CL:0000048!2.72e-11!430;CL:0000183!8.40e-11!59;CL:0000723!1.54e-10!436;CL:0000187!4.97e-10!54;CL:0000034!7.42e-10!444;CL:0000680!1.29e-09!57;CL:0000056!1.29e-09!57;CL:0000355!1.29e-09!57;CL:0000144!4.61e-09!625;CL:0002371!3.86e-08!591;CL:0000393!5.93e-08!60;CL:0000211!5.93e-08!60;CL:0000499!6.93e-08!27;CL:0002334!7.43e-08!12;CL:0002320!1.83e-07!365;CL:0000327!2.33e-07!14;CL:0002620!2.87e-07!23;CL:0000192!3.32e-07!42;CL:0000514!3.32e-07!42;CL:0002570!6.61e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000134;7.36e-11;55!CL:0002334;1.41e-09;12!CL:0000048;3.48e-09;58!CL:0002569;1.92e-08;6!CL:0000723;1.94e-08;61!CL:0000499;1.47e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.84e-18,76;CL:0000048,9.17e-12,427;CL:0000723,3.33e-11,433;CL:0002320,3.66e-11,361;CL:0000034,1.74e-10,441;CL:0002334,1.24e-09,12;CL:0000134,2.02e-09,354;CL:0002569,2.27e-08,6;CL:0000219,6.71e-08,386;CL:0000499,1.44e-07,28;CL:0000349,9.90e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.35e-12!83;UBERON:0002329!5.35e-12!83;UBERON:0003077!5.35e-12!83;UBERON:0003059!5.35e-12!83;UBERON:0007282!5.35e-12!83;UBERON:0009618!5.35e-12!83;UBERON:0007285!5.35e-12!83;UBERON:0004290!1.92e-10!70;UBERON:0001134!4.57e-10!61;UBERON:0002036!4.57e-10!61;UBERON:0003082!4.57e-10!61;UBERON:0002385!6.27e-10!63;UBERON:0001015!6.27e-10!63;UBERON:0000383!6.27e-10!63;UBERON:0000486!2.04e-08!82;UBERON:0005256!2.15e-08!143;UBERON:0002384!9.26e-08!375;UBERON:0001013!2.17e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;7.22e-10;7!UBERON:0009142;7.22e-10;7!UBERON:0004457;1.78e-09;9!UBERON:0000042;1.78e-09;9!UBERON:0003688;8.84e-09;6!UBERON:0002358;8.84e-09;6!UBERON:0003684;8.84e-09;6!UBERON:0001178;8.84e-09;6!UBERON:0003422;1.92e-08;6!UBERON:0002384;6.26e-08;198!UBERON:0001013;9.58e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.33e-11,371;UBERON:0003688,8.43e-09,6;UBERON:0002358,8.43e-09,6;UBERON:0003684,8.43e-09,6;UBERON:0001178,8.43e-09,6;UBERON:0003422,2.27e-08,6;UBERON:0001013,8.85e-07,14 | |||
|phase1_expression=1.81678379270557,5.56661362116556,3.80576891059122,7.00513088471913,8.93922188854576,2.61701557230111,10.1319951267324,0,0.522371256399677,0,0.697801167972428,0.436882744260345,1.31883489114227,0.247532705920093,1.98838425436749,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,2.24400760368678,5.95563970808367,0,0,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.02290049474824,5.78302643815306,1.00267582127178,3.47631645505977,0.795285947051099,0.973269740605272,0.567208902984407,0.665188192387692,1.75669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94549513051573,1.39293562831038,1.19168262731897,10.6129549677061,2.83734705758686,0.560677600142307,0,11.8400423240237,0,0.538842688278752,0.490385709340376,1.36221684880438,2.88087962239999,0.234321431833797,0.312160076830321,0,0.896692083310806,0,0,0.280901613404497,0,0.368502951935304,0.206651562351531,2.37600571456411,8.90160945402805,3.64064544775211,5.74894513452991,0.168336113954066,0,0,2.63386572528503,3.67785354958824,1.95309476578576,0.907457465280168,6.45802688479903,2.98980344345994,1.27159140695737,12.6038260355449,0.412210116953756,9.01741890159702,1.30281799432113,3.37552664482532,0.876933046450788,2.77677151668526,1.65689817556139,0.323292113637624,11.7153165530483,0.302256294682921,0.339121184620975,0,0,0,0.121973706129595,0,0,0,0,0,1.56449532329816,3.21620469096443,0,1.39310378409594,2.16563844500876,0,0,0,0.110293972732394,0,0,0,0,0,0,4.20725321410337,2.8810180793198,2.94017422771084,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,1.74384027533312,0.2933531432838,2.32689088364,10.7296933755565,9.298330278116,1.86156681609409,6.24044621468197,0.257207374262142,0,1.8649552531127,2.28764789853036,6.51145926469732,2.46972101034231,0.65147236858747,5.68627117988073,3.95975936466715,0,0.871533458600294,0.299918973546171,0,0,0,2.15662369942424,10.3375742250703,0,0,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,3.00102312635806,1.89885516589815,15.8057854763413,13.7390321373815,11.8276811275451,2.34282829985426,0.300946099727719,6.82222512167955,0,1.99267679560631,1.84369168541703,0.260650843404249,1.76221041716467,5.83343820478455,0,0,0,0,6.65741758041988,4.83824469327489,3.47350930946288,3.22270143904931,9.82310330515758,3.07533958213682,1.53512174720011,16.5679538777916,1.48418066444991,1.3878872442239,4.6166048581413,0.410635780069046,0,1.74315567689939,0,0,0.0920809889358963,1.26295892981067,2.54927635209404,2.75361271414791,0,0,0,0,0,0,0,0.215915916102139,0,0,2.00675909541941,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0.366277859273374,0.247528499761764,0,0,3.21367859688319,0.193341436584244,0.462145851343933,0.307007349452259,1.10269257987624,0.644521469209642,1.45016693914229,0.852266274161009,3.82837753280971,0.165284915360978,0,0,0,2.32422774648643,13.5369309137175,0.6970372701606,1.23213432070436,0,0,0.55597265731176,0.286249773483982,0.744316738719335,0.316379424718726,3.24071329670502,0.255897791311334,1.28381696410176,0,1.56989728039846,1.07923474549989,4.11805544604082,2.00281083987667,0,0,0,1.46290121726877,0.974853958525138,1.05650146756755,1.22849920267187,4.24216295861138,0,0,0,0,1.15755106853338,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.717056761020258,2.25972794330179,0,0,2.74439925886963,3.29294892959902,0,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0.108647371922008,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,4.81546588379273,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.0967563312890851,0,0,0,0.176512253383001,3.61569185248852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0.201550417460179,5.04419836959365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0.653174720218818,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,3.03827302801392,0.554805861502613,0.378806010550178,0.754703705257725,2.66943366478961,0.915360273587694,1.66354016139563,4.04136721515229,1.18284119991707,1.27437413730962,0.449803112163605,0.776314784381297,1.65882483136342,1.06336685823198,1.04349012362347,7.3626228408637,1.14241563650639,0,1.81848659202559,1.71856891267982,2.78420255927096,1.99047944349308,0,3.77735275701072,4.37774335395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| |||
|short_description=p@chr17:48265259..48265297,+ | |||
}} |
Revision as of 16:12, 20 January 2014
Short description: | p@chr17:48265259..48265297, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48265259..48265297, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.84e-18 | 76 |
multi fate stem cell | 9.17e-12 | 427 |
somatic stem cell | 3.33e-11 | 433 |
connective tissue cell | 3.66e-11 | 361 |
stem cell | 1.74e-10 | 441 |
preadipocyte | 1.24e-09 | 12 |
mesenchymal cell | 2.02e-09 | 354 |
mesenchymal stem cell of umbilical cord | 2.27e-08 | 6 |
motile cell | 6.71e-08 | 386 |
stromal cell | 1.44e-07 | 28 |
extraembryonic cell | 9.90e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.33e-11 | 371 |
omentum | 8.43e-09 | 6 |
peritoneum | 8.43e-09 | 6 |
abdominal cavity | 8.43e-09 | 6 |
visceral peritoneum | 8.43e-09 | 6 |
mesenchyme of umbilical cord | 2.27e-08 | 6 |
adipose tissue | 8.85e-07 | 14 |