FFCP PHASE1:Hg19::chr18:61445205..61445227,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13902 | |||
|TSSclassifier=strong | |||
|UniProt=C9JA68 | |||
|association_with_transcript=0bp_to_ENST00000431370_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_8_at_SERPINB7_5end | |||
|id=chr18:61445205..61445227,+ | |||
|ontology_enrichment_celltype=CL:0002620!4.25e-09!23;CL:0000188!2.96e-08!9;CL:0002159!1.23e-07!13;CL:0002504!1.71e-07!3;CL:1000279!1.71e-07!3;CL:1000280!1.71e-07!3;CL:0000594!3.03e-07!3;CL:0002166!3.44e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.69e-12;3!CL:0000388;2.69e-12;3!CL:0002231;4.99e-12;3!CL:0000228;1.68e-09;1!CL:0002372;1.68e-09;1!CL:0002601;1.68e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.85e-12,3;CL:0000388,2.85e-12,3;CL:0002231,3.77e-12,3;CL:0002601,1.25e-09,1;CL:0000228,1.48e-09,1;CL:0002372,1.48e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.74e-10;1!DOID:4549;3.74e-10;1!DOID:5861;3.74e-10;1!DOID:6496;3.74e-10;1!DOID:6193;1.68e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.74e-10,1;DOID:4549,3.74e-10,1;DOID:5861,3.74e-10,1;DOID:6496,3.74e-10,1;DOID:6193,2.46e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.57e-10!95;UBERON:0002199!2.20e-08!45;UBERON:0002416!2.20e-08!45;UBERON:0002097!1.94e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.69e-12;3!UBERON:0000043;2.69e-12;3!UBERON:0007845;2.69e-12;3!UBERON:0002367;1.93e-07;11!UBERON:0010147;1.93e-07;11!UBERON:0003937;7.40e-07;12!UBERON:0005399;7.40e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.85e-12,3;UBERON:0000043,2.85e-12,3;UBERON:0007845,2.85e-12,3;UBERON:0002367,1.71e-07,11;UBERON:0010147,1.71e-07,11;UBERON:0009846,1.71e-07,11;UBERON:0003353,1.71e-07,11;UBERON:0004902,1.71e-07,11;UBERON:0003820,1.71e-07,11;UBERON:0009847,1.71e-07,11;UBERON:0003937,6.63e-07,12;UBERON:0005399,6.63e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,1.28820270022815,2.79175284497385,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.302256294682921,1.01736355386293,0.193260853163297,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,1.91005047582099,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,1.48864684691266,0,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0,0,0,0,1.80455823272956,2.4861867012692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.551346289938122,0.644521469209642,0.725083469571143,0.170453254832202,0.0890320356467374,0.495854746082934,0,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.54907405947211,0.706874414074119,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,1.14729081763241,0.0982490410131212,0,1.77380532035299,0,0,0,0,0.577332676353072,0,0,0,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,15.3996776842137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35059857767087,0,1.0319161948297,0,0,0,0,28.2419605412801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,0,0,0,0,0.542999601753713,0,8.49127136284464,0,0,3.06698439213759,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15496660705154,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,8.89851215136553,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0.3414369541879,1.38251932362818,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,2.23197010900051,0,3.46101249699031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.0620747142958579,0.112131862580613,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0.213454691755431,5.7921684686082,0,0,0,0,0,0,0 | |||
|short_description=p8@SERPINB7 | |||
}} |
Revision as of 19:42, 20 January 2014
Short description: | p8@SERPINB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SERPINB7_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 0bp_to_ENST00000431370_5end |
EntrezGene: | SERPINB7 |
HGNC: | 13902 |
UniProt: | C9JA68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.85e-12 | 3 |
tendon cell | 2.85e-12 | 3 |
epithelial cell of prostate | 3.77e-12 | 3 |
uterine smooth muscle cell | 1.25e-09 | 1 |
multinucleate cell | 1.48e-09 | 1 |
myotube | 1.48e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.85e-12 | 3 |
tendon | 2.85e-12 | 3 |
regular connective tissue | 2.85e-12 | 3 |
prostate gland | 1.71e-07 | 11 |
male accessory sex gland | 1.71e-07 | 11 |
embryonic cloacal epithelium | 1.71e-07 | 11 |
epithelium of hindgut | 1.71e-07 | 11 |
urogenital sinus epithelium | 1.71e-07 | 11 |
prostate bud | 1.71e-07 | 11 |
prostate field | 1.71e-07 | 11 |
sex gland | 6.63e-07 | 12 |
male reproductive gland | 6.63e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.74e-10 | 1 |
extraosseous chondrosarcoma | 3.74e-10 | 1 |
myxoid chondrosarcoma | 3.74e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 3.74e-10 | 1 |
epithelioid sarcoma | 2.46e-09 | 1 |