FFCP PHASE1:Hg19::chr19:10679527..10679552,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1032 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1790 | |||
|TSSclassifier=strong | |||
|UniProt=P55273 | |||
|association_with_transcript=78bp_to_ENST00000393599,NM_001800,uc002mpa.2_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_4_at_CDKN2D_5end | |||
|id=chr19:10679527..10679552,- | |||
|ontology_enrichment_celltype=CL:0000738!1.30e-15!140;CL:0000037!6.45e-13!172;CL:0000566!6.45e-13!172;CL:0002031!4.42e-12!124;CL:0000988!4.82e-12!182;CL:0002087!1.19e-11!119;CL:0002032!5.20e-11!165;CL:0000837!5.20e-11!165;CL:0000838!9.36e-11!52;CL:0000542!1.33e-10!53;CL:0000051!1.33e-10!53;CL:0000084!1.47e-10!25;CL:0000827!1.47e-10!25;CL:0000791!2.42e-10!18;CL:0000789!2.42e-10!18;CL:0002420!2.42e-10!18;CL:0002419!2.42e-10!18;CL:0000790!2.42e-10!18;CL:0000625!1.91e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.11e-13;25!CL:0000791;5.32e-13;18!CL:0000789;5.32e-13;18!CL:0002419;5.32e-13;18!CL:0000625;3.37e-09;11!CL:0000542;3.12e-08;53!CL:0000094;5.65e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.27e-21,136;CL:0000037,1.72e-16,168;CL:0002031,9.07e-16,120;CL:0000988,1.65e-15,177;CL:0002087,2.32e-14,115;CL:0002032,5.93e-14,161;CL:0000837,5.93e-14,161;CL:0000084,1.12e-13,25;CL:0000827,1.12e-13,25;CL:0000838,6.92e-13,52;CL:0000791,7.90e-13,18;CL:0000789,7.90e-13,18;CL:0002420,7.90e-13,18;CL:0002419,7.90e-13,18;CL:0000790,7.90e-13,18;CL:0000542,2.35e-12,53;CL:0000051,2.35e-12,53;CL:0000625,4.08e-09,11;CL:0000766,2.81e-08,72;CL:0002393,5.83e-08,9;CL:0002397,5.83e-08,9;CL:0000094,6.85e-08,8;CL:0000219,3.55e-07,386;CL:0000134,4.73e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;5.32e-13;18!CL:0000051;3.12e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.09e-08!102;UBERON:0003061!8.09e-08!102;UBERON:0002193!2.84e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.55e-08;15!UBERON:0000179;4.55e-08;15!UBERON:0000463;4.55e-08;15!UBERON:0002390;4.25e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.07e-10,98;UBERON:0003061,1.07e-10,98;UBERON:0002193,1.64e-09,108;UBERON:0000178,5.13e-08,15;UBERON:0000179,5.13e-08,15;UBERON:0000463,5.13e-08,15 | |||
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| |||
|short_description=p4@CDKN2D | |||
}} |
Revision as of 21:18, 20 January 2014
Short description: | p4@CDKN2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDKN2D_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 78bp_to_ENST00000393599, NM_001800, uc002mpa.2_5end |
EntrezGene: | CDKN2D |
HGNC: | 1790 |
UniProt: | P55273 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.27e-21 | 136 |
hematopoietic stem cell | 1.72e-16 | 168 |
hematopoietic lineage restricted progenitor cell | 9.07e-16 | 120 |
hematopoietic cell | 1.65e-15 | 177 |
nongranular leukocyte | 2.32e-14 | 115 |
hematopoietic oligopotent progenitor cell | 5.93e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.93e-14 | 161 |
T cell | 1.12e-13 | 25 |
pro-T cell | 1.12e-13 | 25 |
lymphoid lineage restricted progenitor cell | 6.92e-13 | 52 |
mature alpha-beta T cell | 7.90e-13 | 18 |
alpha-beta T cell | 7.90e-13 | 18 |
immature T cell | 7.90e-13 | 18 |
mature T cell | 7.90e-13 | 18 |
immature alpha-beta T cell | 7.90e-13 | 18 |
lymphocyte | 2.35e-12 | 53 |
common lymphoid progenitor | 2.35e-12 | 53 |
CD8-positive, alpha-beta T cell | 4.08e-09 | 11 |
myeloid leukocyte | 2.81e-08 | 72 |
intermediate monocyte | 5.83e-08 | 9 |
CD14-positive, CD16-positive monocyte | 5.83e-08 | 9 |
granulocyte | 6.85e-08 | 8 |
motile cell | 3.55e-07 | 386 |
mesenchymal cell | 4.73e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-10 | 98 |
blood island | 1.07e-10 | 98 |
hemolymphoid system | 1.64e-09 | 108 |
blood | 5.13e-08 | 15 |
haemolymphatic fluid | 5.13e-08 | 15 |
organism substance | 5.13e-08 | 15 |