FFCP PHASE1:Hg19::chr19:19626951..19626991,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30410 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BXA6 | |||
|association_with_transcript=-113bp_to_ENST00000360913_5end | |||
|description=CAGE_peak_1_at_TSSK6_5end | |||
|id=chr19:19626951..19626991,- | |||
|ontology_enrichment_celltype=CL:0000838!7.01e-17!52;CL:0000542!8.24e-17!53;CL:0000051!8.24e-17!53;CL:0000084!1.28e-11!25;CL:0000827!1.28e-11!25;CL:0000988!2.32e-11!182;CL:0000791!7.31e-11!18;CL:0000789!7.31e-11!18;CL:0002420!7.31e-11!18;CL:0002419!7.31e-11!18;CL:0000790!7.31e-11!18;CL:0000738!7.80e-11!140;CL:0000037!7.83e-11!172;CL:0000566!7.83e-11!172;CL:0002032!5.21e-10!165;CL:0000837!5.21e-10!165;CL:0002087!1.27e-09!119;CL:0002031!1.72e-09!124;CL:0000625!7.03e-08!11;CL:0000236!2.16e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000084;9.82e-13;25!CL:0000791;2.74e-12;18!CL:0000789;2.74e-12;18!CL:0002419;2.74e-12;18!CL:0000542;1.27e-11;53!CL:0000236;1.05e-09;13!CL:0000625;4.70e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.21e-18,52;CL:0000542,6.02e-18,53;CL:0000051,6.02e-18,53;CL:0000084,6.07e-13,25;CL:0000827,6.07e-13,25;CL:0000791,2.24e-12,18;CL:0000789,2.24e-12,18;CL:0002420,2.24e-12,18;CL:0002419,2.24e-12,18;CL:0000790,2.24e-12,18;CL:0000738,2.01e-11,136;CL:0000988,5.49e-11,177;CL:0000037,2.51e-10,168;CL:0002087,3.91e-10,115;CL:0002031,4.29e-10,120;CL:0002032,1.03e-09,161;CL:0000837,1.03e-09,161;CL:0000625,3.35e-09,11;CL:0000236,1.57e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000790;2.74e-12;18!CL:0000051;1.27e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@TSSK6 | |||
}} |
Revision as of 22:21, 20 January 2014
Short description: | p1@TSSK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSSK6_5end |
Coexpression cluster: | NA |
Association with transcript: | -113bp_to_ENST00000360913_5end |
EntrezGene: | TSSK6 |
HGNC: | 30410 |
UniProt: | Q9BXA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.21e-18 | 52 |
lymphocyte | 6.02e-18 | 53 |
common lymphoid progenitor | 6.02e-18 | 53 |
T cell | 6.07e-13 | 25 |
pro-T cell | 6.07e-13 | 25 |
mature alpha-beta T cell | 2.24e-12 | 18 |
alpha-beta T cell | 2.24e-12 | 18 |
immature T cell | 2.24e-12 | 18 |
mature T cell | 2.24e-12 | 18 |
immature alpha-beta T cell | 2.24e-12 | 18 |
leukocyte | 2.01e-11 | 136 |
hematopoietic cell | 5.49e-11 | 177 |
hematopoietic stem cell | 2.51e-10 | 168 |
nongranular leukocyte | 3.91e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.29e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.03e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-09 | 161 |
CD8-positive, alpha-beta T cell | 3.35e-09 | 11 |
B cell | 1.57e-08 | 14 |