FFCP PHASE1:Hg19::chr19:49496557..49496573,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2997 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4706 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BTT9,P13807,F5H3S3,B7Z806,F5H1N8 | |||
|association_with_transcript=0bp_to_ENST00000263276,ENST00000323798,ENST00000540532,ENST00000541188,ENST00000544287,uc010xzy.1_5end | |||
|description=CAGE_peak_1_at_GYS1_5end | |||
|id=chr19:49496557..49496573,- | |||
|ontology_enrichment_celltype=CL:0000055!6.13e-16!180;CL:0000183!2.67e-14!59;CL:0000680!4.44e-14!57;CL:0000056!4.44e-14!57;CL:0000355!4.44e-14!57;CL:0000222!1.01e-13!119;CL:0000187!5.93e-13!54;CL:0000192!1.98e-11!42;CL:0000514!1.98e-11!42;CL:0000359!4.18e-11!32;CL:0000393!4.98e-10!60;CL:0000211!4.98e-10!60;CL:0000220!8.16e-10!246;CL:0002321!1.23e-09!248;CL:0000325!8.16e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.56e-10;32!CL:0000192;2.89e-08;43!CL:0000187;2.12e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.89e-13,58;CL:0000056,1.89e-13,58;CL:0000355,1.89e-13,58;CL:0000222,2.28e-13,121;CL:0000187,2.43e-12,55;CL:0000359,4.18e-11,32;CL:0000192,8.93e-11,43;CL:0000514,8.93e-11,43;CL:0000393,1.49e-09,61;CL:0000211,1.49e-09,61;CL:0002321,1.76e-09,250;CL:0000057,9.64e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;2.89e-08;43!CL:0000355;9.04e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!4.46e-17!82;UBERON:0004872!9.06e-17!84;UBERON:0004290!1.38e-16!70;UBERON:0001134!2.52e-16!61;UBERON:0002036!2.52e-16!61;UBERON:0003082!2.52e-16!61;UBERON:0002385!7.61e-16!63;UBERON:0001015!7.61e-16!63;UBERON:0000383!7.61e-16!63;UBERON:0000914!1.87e-15!83;UBERON:0002329!1.87e-15!83;UBERON:0003077!1.87e-15!83;UBERON:0003059!1.87e-15!83;UBERON:0007282!1.87e-15!83;UBERON:0009618!1.87e-15!83;UBERON:0007285!1.87e-15!83;UBERON:0001637!5.49e-15!42;UBERON:0003509!5.49e-15!42;UBERON:0004572!5.49e-15!42;UBERON:0001981!7.65e-15!60;UBERON:0007500!7.65e-15!60;UBERON:0004537!7.65e-15!60;UBERON:0006965!7.65e-15!60;UBERON:0005256!1.28e-13!143;UBERON:0000055!1.68e-13!69;UBERON:0000475!3.85e-13!365;UBERON:0000119!4.59e-13!312;UBERON:0003914!4.63e-13!118;UBERON:0002049!5.80e-13!79;UBERON:0007798!5.80e-13!79;UBERON:0000483!8.25e-13!309;UBERON:0002100!1.51e-12!216;UBERON:0004573!1.30e-11!33;UBERON:0004571!1.30e-11!33;UBERON:0000490!1.74e-11!138;UBERON:0003103!4.51e-11!69;UBERON:0003104!5.93e-11!238;UBERON:0009142!5.93e-11!238;UBERON:0000481!1.09e-10!347;UBERON:0001009!1.69e-09!113;UBERON:0004535!2.14e-08!110;UBERON:0000477!7.02e-07!286;UBERON:0007100!9.48e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.35e-11;42!UBERON:0003509;7.35e-11;42!UBERON:0004572;7.35e-11;42!UBERON:0004573;1.80e-10;33!UBERON:0004571;1.80e-10;33!UBERON:0007500;5.16e-08;56!UBERON:0001981;5.16e-08;56!UBERON:0004537;5.16e-08;56!UBERON:0003914;2.97e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.16e-17,78;UBERON:0004872,1.52e-16,83;UBERON:0000486,1.67e-16,83;UBERON:0002329,5.80e-16,71;UBERON:0003059,5.80e-16,71;UBERON:0007282,5.80e-16,71;UBERON:0004290,5.80e-16,71;UBERON:0009618,5.80e-16,71;UBERON:0003077,9.25e-16,72;UBERON:0007285,9.25e-16,72;UBERON:0001134,1.18e-15,62;UBERON:0002036,1.18e-15,62;UBERON:0003082,1.18e-15,62;UBERON:0007524,1.89e-15,73;UBERON:0002385,3.35e-15,64;UBERON:0001015,3.35e-15,64;UBERON:0000383,3.35e-15,64;UBERON:0001637,5.49e-15,42;UBERON:0003509,5.49e-15,42;UBERON:0004572,5.49e-15,42;UBERON:0007500,1.27e-14,59;UBERON:0001981,1.27e-14,59;UBERON:0004537,1.27e-14,59;UBERON:0006965,1.27e-14,59;UBERON:0003104,1.82e-14,160;UBERON:0009142,1.82e-14,160;UBERON:0003914,1.88e-13,117;UBERON:0000119,2.53e-13,309;UBERON:0000055,2.78e-13,68;UBERON:0000483,4.57e-13,306;UBERON:0002049,9.53e-13,78;UBERON:0007798,9.53e-13,78;UBERON:0002100,1.45e-12,199;UBERON:0005256,5.02e-12,122;UBERON:0000490,6.73e-12,148;UBERON:0004573,1.30e-11,33;UBERON:0004571,1.30e-11,33;UBERON:0003103,1.47e-11,68;UBERON:0001009,2.59e-09,112;UBERON:0004535,3.23e-08,109;UBERON:0007100,9.48e-07,27 | |||
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| |||
|short_description=p1@GYS1 | |||
}} |
Revision as of 00:25, 21 January 2014
Short description: | p1@GYS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GYS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263276, ENST00000323798, ENST00000540532, ENST00000541188, ENST00000544287, uc010xzy.1_5end |
EntrezGene: | GYS1 |
HGNC: | 4706 |
UniProt: | Q9BTT9P13807F5H3S3B7Z806F5H1N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.89e-13 | 58 |
myoblast | 1.89e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.89e-13 | 58 |
mesodermal cell | 2.28e-13 | 121 |
muscle cell | 2.43e-12 | 55 |
vascular associated smooth muscle cell | 4.18e-11 | 32 |
smooth muscle cell | 8.93e-11 | 43 |
smooth muscle myoblast | 8.93e-11 | 43 |
electrically responsive cell | 1.49e-09 | 61 |
electrically active cell | 1.49e-09 | 61 |
embryonic cell | 1.76e-09 | 250 |
fibroblast | 9.64e-07 | 76 |