FFCP PHASE1:Hg19::chr2:17381145..17381164,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C275 | |||
|description=CAGE_peak_at_chr2:17381145..17381164,- | |||
|id=chr2:17381145..17381164,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!7.40e-54!15;UBERON:0003057!7.40e-54!15;UBERON:0002298!7.00e-52!8;UBERON:0000988!1.35e-50!3;UBERON:0004733!1.09e-34!12;UBERON:0002028!1.09e-34!12;UBERON:0007277!1.09e-34!12;UBERON:0002148!3.62e-34!2;UBERON:0009662!3.62e-34!2;UBERON:0001049!1.35e-33!57;UBERON:0005068!1.35e-33!57;UBERON:0006241!1.35e-33!57;UBERON:0007135!1.35e-33!57;UBERON:0004732!4.84e-32!13;UBERON:0003075!1.81e-26!86;UBERON:0007284!1.81e-26!86;UBERON:0005743!3.68e-26!86;UBERON:0002346!2.83e-25!90;UBERON:0000073!1.15e-23!94;UBERON:0001016!1.15e-23!94;UBERON:0002240!2.63e-23!3;UBERON:0006331!3.68e-23!3;UBERON:0001896!4.61e-23!3;UBERON:0005290!4.61e-23!3;UBERON:0010096!4.61e-23!3;UBERON:0001017!5.52e-23!82;UBERON:0002616!1.37e-21!59;UBERON:0000955!3.75e-18!69;UBERON:0006238!3.75e-18!69;UBERON:0007190!1.22e-17!1;UBERON:0002581!1.44e-17!1;UBERON:0002680!2.15e-17!9;UBERON:0001895!2.15e-17!9;UBERON:0010092!2.15e-17!9;UBERON:0007023!1.57e-16!115;UBERON:0005174!2.11e-14!5;UBERON:0001137!2.11e-14!5;UBERON:0004121!5.56e-13!169;UBERON:0000924!1.15e-12!173;UBERON:0006601!1.15e-12!173;UBERON:0000033!2.05e-12!123;UBERON:0000200!7.91e-12!6;UBERON:0002020!7.98e-12!34;UBERON:0003528!7.98e-12!34;UBERON:0000153!8.27e-12!129;UBERON:0007811!8.27e-12!129;UBERON:0001870!2.02e-09!2;UBERON:0000025!2.09e-09!194;UBERON:0002308!2.29e-08!9;UBERON:0000125!2.29e-08!9;UBERON:0001869!3.07e-08!32;UBERON:0001893!8.78e-08!34;UBERON:0001950!1.28e-07!20;UBERON:0004111!2.21e-07!241;UBERON:0002619!5.31e-07!22;UBERON:0000483!9.54e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;2.39e-66;3!UBERON:0002298;4.27e-34;6!UBERON:0002680;2.62e-23;9!UBERON:0001895;2.62e-23;9!UBERON:0004733;6.76e-18;12!UBERON:0002028;6.76e-18;12!UBERON:0004732;1.21e-16;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,2.39e-66,3;UBERON:0002298,4.27e-34,6;UBERON:0002680,2.62e-23,9;UBERON:0001895,2.62e-23,9;UBERON:0010092,2.62e-23,9;UBERON:0004733,6.76e-18,12;UBERON:0002028,6.76e-18,12;UBERON:0007277,6.76e-18,12;UBERON:0004732,1.21e-16,13;UBERON:0003076,1.22e-14,15;UBERON:0003057,1.22e-14,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24300118823545,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:17381145..17381164,- | |||
}} | |||
Revision as of 01:51, 21 January 2014
| Short description: | p@chr2:17381145..17381164, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | No |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr2:17381145..17381164, - |
| Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pons | 2.39e-66 | 3 |
| brainstem | 4.27e-34 | 6 |
| regional part of metencephalon | 2.62e-23 | 9 |
| metencephalon | 2.62e-23 | 9 |
| future metencephalon | 2.62e-23 | 9 |
| segmental subdivision of hindbrain | 6.76e-18 | 12 |
| hindbrain | 6.76e-18 | 12 |
| presumptive hindbrain | 6.76e-18 | 12 |
| segmental subdivision of nervous system | 1.21e-16 | 13 |
| posterior neural tube | 1.22e-14 | 15 |
| chordal neural plate | 1.22e-14 | 15 |
