FFCP PHASE1:Hg19::chr2:30670127..30670186,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253558 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26756 | |||
|TSSclassifier=strong | |||
|UniProt=C9K0C3,F8WEY2,A6H8Z7,Q6UWP7 | |||
|association_with_transcript=0bp_to_ENST00000476038,ENST00000478015,ENST00000540623,NM_001002257,uc002rnk.1,uc002rnl.2,uc010ymq.1_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_2_at_LCLAT1_5end | |||
|id=chr2:30670127..30670186,+ | |||
|ontology_enrichment_celltype=CL:0000223!2.19e-07!59;CL:0002620!8.02e-07!23 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.56e-07,58;CL:0002620,8.01e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.86e-32!235;DOID:14566!2.97e-32!239;DOID:0050687!4.81e-22!143;DOID:305!8.63e-21!106;DOID:0050686!1.08e-15!137;DOID:7!2.28e-08!39;DOID:2531!4.52e-08!51;DOID:0060083!4.52e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:7;4.64e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.68e-32,235;DOID:14566,2.70e-32,239;DOID:0050687,4.37e-22,143;DOID:305,7.78e-21,106;DOID:0050686,1.05e-15,137;DOID:7,2.20e-08,39;DOID:2531,4.51e-08,51;DOID:0060083,4.51e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.74e-10!155;UBERON:0001555!3.74e-10!155;UBERON:0007026!3.74e-10!155;UBERON:0004119!4.63e-09!169;UBERON:0000925!4.63e-09!169;UBERON:0006595!4.63e-09!169;UBERON:0002097!5.60e-09!40;UBERON:0004921!1.67e-07!129;UBERON:0004185!1.67e-07!129;UBERON:0000077!7.13e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.44e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.16e-09,41;UBERON:0001007,3.09e-08,145;UBERON:0001555,3.09e-08,145;UBERON:0007026,3.09e-08,145;UBERON:0004119,2.69e-07,160;UBERON:0000925,2.69e-07,160;UBERON:0006595,2.69e-07,160 | |||
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| |||
|short_description=p2@LCLAT1 | |||
}} |
Revision as of 02:27, 21 January 2014
Short description: | p2@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LCLAT1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000476038, ENST00000478015, ENST00000540623, NM_001002257, uc002rnk.1, uc002rnl.2, uc010ymq.1_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | C9K0C3F8WEY2A6H8Z7Q6UWP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.56e-07 | 58 |
skin fibroblast | 8.01e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.16e-09 | 41 |
digestive system | 3.09e-08 | 145 |
digestive tract | 3.09e-08 | 145 |
primitive gut | 3.09e-08 | 145 |
endoderm-derived structure | 2.69e-07 | 160 |
endoderm | 2.69e-07 | 160 |
presumptive endoderm | 2.69e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.68e-32 | 235 |
disease of cellular proliferation | 2.70e-32 | 239 |
cell type cancer | 4.37e-22 | 143 |
carcinoma | 7.78e-21 | 106 |
organ system cancer | 1.05e-15 | 137 |
disease of anatomical entity | 2.20e-08 | 39 |
hematologic cancer | 4.51e-08 | 51 |
immune system cancer | 4.51e-08 | 51 |