FFCP PHASE1:Hg19::chr2:149895265..149895271,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27018 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NI32 | |||
|association_with_transcript=33bp_to_ENST00000409876_5end | |||
|coexpression_cluster_id=C2661 | |||
|description=CAGE_peak_7_at_LYPD6B_5end | |||
|id=chr2:149895265..149895271,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.69e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.50e-11;5!CL:0000197;6.15e-10;6!CL:0000098;6.15e-10;6!CL:0002167;6.15e-10;6!CL:0000222;4.08e-07;1!CL:0000342;4.08e-07;1!CL:0002565;4.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.06e-11,5;CL:0000197,7.16e-10,6;CL:0000098,7.16e-10,6;CL:0002167,7.16e-10,6;CL:0000342,2.84e-07,1;CL:0002565,2.84e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.58e-07;1!UBERON:0005754;4.08e-07;1 | |||
|ontology_enrichment_disease=DOID:305!4.52e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.58e-07;1!DOID:3149;1.58e-07;1!DOID:5093;6.68e-07;4!DOID:1612;6.68e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.09e-07,1;DOID:3149,2.09e-07,1;DOID:5093,5.05e-07,4;DOID:1612,5.05e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007625!4.97e-09!11;UBERON:0003102!1.43e-07!95;UBERON:0001444!2.14e-07!48;UBERON:0000970!3.23e-07!20;UBERON:0001456!9.17e-07!21;UBERON:0002104!9.89e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.18e-08;7!UBERON:0000998;4.08e-07;1!UBERON:0006868;4.08e-07;1!UBERON:0002506;4.08e-07;1!UBERON:0001769;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.78e-08,7;UBERON:0004871,2.67e-07,8;UBERON:0002506,2.84e-07,1;UBERON:0001769,2.84e-07,1;UBERON:0000998,4.34e-07,1;UBERON:0006868,4.34e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.378139268656271,0.443458794925128,0.966182642624386,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0,0.89694817844431,1.2813443329114,0.211931901159562,0.300091096084402,0,0,0.930584281657949,0,0.0974370051611986,0,0.276149695926898,0,0.710019185033229,1.10827308050404,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,1.71567810298526,0.219500570817251,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.579652024875384,0.70445216541493,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,2.3195768543631,5.04647728108591,2.10854546986884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,1.81289174387433,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.491245205065606,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.747768497892312,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,3.34242278632766,1.18785872333055,1.84296421259539,0,0.140669416410513,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,2.86470537193757,0.349839999984783,0,0,0,1.18193840883968,0.344743373241465,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0.113942055847001,0,0,0.217294743844016,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0.978323094660449,0,0.394584402849391,0,0,0,0.300646838828985,0.103688191397247,0,0,0.313932918407225,0,0,0,2.77695581336209,0.881931576729399,0.0870592065804026,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0.391102765469606,0.0801588202515337,2.13452994739353,0,1.72908500584927,0,0,0,2.36079817574322,0.235694034616795,0,0,2.95794831145333,0,0,0.136905378891993,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,1.18112977817699,0,0,0,0,0,0,0.2249738915515,3.0952078182318,0,2.0126081255956,0.394028536495991,0.419636705079985,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0.704815022316672,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0.243585196761792,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.499921631848426,0,0,0.235265819698172,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,1.26184898228651,0,0,0.782982875895635,1.58694147858591,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0.707818340086442,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,0.548257766857182,0,0,1.27762427639595,0.535701835878287,0.336283722218824,0,0,0,0,0,0,0,0,0,0.235479278551542,0,1.68163297988273,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,2.7492824225286,0,0,0,0,0.121917924982269,0,0,0,0.971421986118279,0.467878926924211,0.994753875806841,0.356760272332706,1.01651473835064,0,0,0,0,0,0.490296643507811,0.235676547101626,0,0,0,0,0,0,0,1.42843150884526,0.352894871715692,0,2.92134555298607,0.458729283404541,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0.275684698604535,0,0.151557396436479,0,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0,0,0,0.202056159043763,0.215166616178029,0,0.732629417498771,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0.641136984606466 | |||
|short_description=p7@LYPD6B | |||
}} |
Revision as of 05:54, 21 January 2014
Short description: | p7@LYPD6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LYPD6B_5end |
Coexpression cluster: | C2661_amniotic_endometrioid_squamous_Olfactory_rectal_stomach_bronchogenic |
Association with transcript: | 33bp_to_ENST00000409876_5end |
EntrezGene: | LYPD6B |
HGNC: | 27018 |
UniProt: | Q8NI32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.06e-11 | 5 |
receptor cell | 7.16e-10 | 6 |
sensory epithelial cell | 7.16e-10 | 6 |
olfactory epithelial cell | 7.16e-10 | 6 |
pigment cell (sensu Vertebrata) | 2.84e-07 | 1 |
iris pigment epithelial cell | 2.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.78e-08 | 7 |
somatic layer of lateral plate mesoderm | 2.67e-07 | 8 |
iris epithelium | 2.84e-07 | 1 |
iris | 2.84e-07 | 1 |
seminal vesicle | 4.34e-07 | 1 |
seminal fluid secreting gland | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.09e-07 | 1 |
keratoacanthoma | 2.09e-07 | 1 |
thoracic cancer | 5.05e-07 | 4 |
breast cancer | 5.05e-07 | 4 |