FFCP PHASE1:Hg19::chr20:16553949..16553973,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55614 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15869 | |||
|TSSclassifier=strong | |||
|UniProt=Q96L93 | |||
|association_with_transcript=104bp_to_ENST00000354981,ENST00000355755,ENST00000377997,ENST00000378003,ENST00000408042,uc002wpg.1,uc010gch.1,uc010gci.1,uc010gcj.1_5end | |||
|description=CAGE_peak_3_at_KIF16B_5end | |||
|id=chr20:16553949..16553973,- | |||
|ontology_enrichment_celltype=CL:0000223!3.37e-10!59;CL:0002076!8.97e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.24e-07;42!CL:0002251;6.78e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,6.07e-13,58;CL:0002076,1.86e-08,42;CL:0000066,4.09e-07,253;CL:0002251,7.25e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.33e-11;31!CL:0000223;6.16e-07;58!UBERON:0003918;8.31e-07;10!UBERON:0007687;8.31e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.88e-11!143;DOID:305!3.58e-09!106;DOID:162!4.69e-09!235;DOID:14566!2.84e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.79e-12,143;DOID:305,3.74e-10,106;DOID:162,6.22e-10,235;DOID:14566,5.13e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.11e-15!169;UBERON:0000925!3.11e-15!169;UBERON:0006595!3.11e-15!169;UBERON:0001007!2.11e-14!155;UBERON:0001555!2.11e-14!155;UBERON:0007026!2.11e-14!155;UBERON:0004921!9.01e-12!129;UBERON:0004185!9.01e-12!129;UBERON:0005409!3.87e-11!35;UBERON:0000160!1.64e-09!27;UBERON:0000077!9.11e-09!130;UBERON:0000062!9.52e-09!511;UBERON:0005177!1.51e-08!107;UBERON:0000481!8.90e-08!347;UBERON:0005911!3.09e-07!82;UBERON:0000466!6.82e-07!126;UBERON:0007023!8.39e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.52e-09;22!UBERON:0004921;4.61e-08;33!UBERON:0000160;5.74e-08;17!UBERON:0000059;3.90e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.31e-14,160;UBERON:0000925,3.31e-14,160;UBERON:0006595,3.31e-14,160;UBERON:0001007,5.51e-13,145;UBERON:0001555,5.51e-13,145;UBERON:0007026,5.51e-13,145;UBERON:0004921,2.40e-11,118;UBERON:0005409,9.46e-10,25;UBERON:0005177,1.97e-09,101;UBERON:0011216,8.71e-09,223;UBERON:0005911,2.85e-08,82;UBERON:0000160,3.13e-08,17;UBERON:0000059,2.71e-07,11 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.866364470720326,1.65698687863958,0.672325146451775,0,0,0,0.738726348460727,0.408001382488506,0,1.71741592278634,1.50561867580173,1.63205431473244,0.382067028739756,0.328402357799783,0.550975469195755,0,0.767658796194425,0.154816123316076,1.83884244895785,3.614471025339,1.10926203050036,2.63388481973026,0.995184627411951,0.880801318004542,0,0.200544447470142,0.434021741431704,4.25439401055856,14.2513213048351,2.57575567634187,0.145398238779565,0.755751887377619,0.242584061187816,0,0,0,0.28769239232215,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0.112328631146495,0.450530678524519,0.32145117339416,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,1.20118796110804,1.14950487990897,0,0.954053754535364,1.70763890732835,0.587237189370939,1.14681968437569,1.32171328579026,1.12101712596307,0.263384084775077,0.196709770113833,0,0.411202997999018,0.501559486172034,0.32592226663359,0,1.94826728407911,0.334231370655521,0.589211814949674,0.443067789167242,0.541607727530031,0,0,0.493313713811028,0,0.579606171470105,0.444859689486181,0.267540828089713,0,0,0,0.34362744548263,0.506039384039006,0,0.651083453856419,0.950452044448374,0.451725357233318,1.15187950038977,1.24930726552346,0,0.821127996921047,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0.973269740605272,1.89069634328136,0.886917589850256,0.790513071238134,2.48860243445654,0.728590576585084,0.741568885568859,0.324547393654683,0.348259474598534,1.59549552622638,0.238490624305342,0,0.371457501329565,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,1.42306505074684,1.67360306382335,0.402829317109147,0,1.22031028774085,0,0.81014194788176,2.23249320710199,1.57170560838319,1.12611480483322,1.53316637465883,0,0.549605231791222,0,0,0.872188104285069,0,0,0.397227542439656,0.860509862246441,0,0,0,0.74000264525148,1.8672662123986,0.538842688278752,0.653847612453835,0.605429710579726,0,0.468642863667593,0,0.570471821544449,0.448346041655403,0.939475989150119,0.809364721840658,1.12360645361799,0.408308342509787,1.22834317311768,0.516628905878827,2.37600571456411,0.494533858557114,0,0,0.673344455816265,2.50237039743928,0.831192346452549,0.438977620880838,0,0.45071417671979,0.680593098960126,0.358779271377724,0.85422955527427,0.211931901159562,0.600182192168805,0.721367704669072,0,0,0,0.194874010322397,2.01947019395292,0.552299391853796,0.484938170456436,0,0.10075209822764,0,2.70565194428616,4.63668405004419,1.72082757233402,2.19552671033272,2.65059536642971,1.74290914304278,2.07322110030741,1.00928340350251,4.37972830890996,1.56449532329816,0.643240938192885,0,0,0,0.236613600079688,0.674338760312407,0.723033089650446,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0,1.92373578473195,0,0,0,0,5.07020139287323,7.86261773342101,3.54473944008842,0,1.22988438543114,0.343135620597051,3.29250856225877,0,2.6137532827024,2.31471112896324,0,0,0,2.89826012437692,0.469634776943287,0.288732895522148,0,1.14152491340759,2.37061319387782,0,4.43190610957315,2.80805118167085,1.48631162288728,0.93733833986777,3.02367830757947,1.13420077793909,1.07470227243418,1.45316969256981,1.15014803749563,4.43396914106349,0.880484340132261,0.829312462163088,0.576479813667846,0.75745460055828,0.698476837213859,0.763976851116555,0,0,0.719792448923265,0.600686115687835,2.00078502841405,0.224262168690721,1.30788020649984,0.4400297149257,0.646358578788889,0,0,1.32969058292435,1.04007436911366,0.514414748524284,0,0.266422179016099,0.857867961948885,0,0,0.65147236858747,0.710783897485092,0.791951872933429,0,0,0.199945982364114,3.64871341923571,2.51128545716063,4.21667878966063,0.479249710983165,0,0,0.579125226670317,0.61642896765115,1.07436577943937,0,0.197030760201927,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0.858840442033979,0,0.542530047399471,0.415941723061614,1.07057393278297,0.157702415033935,0.468565659970853,0.601892199455438,2.27407504055985,0,1.32845119707087,0,0.521301686808497,0,0.343143423810856,0.620304078368662,0.215714200818617,0.106727557803444,0,1.66435439510497,1.20956117331872,0.496215615637554,0.61384789315225,0,0.256278298511402,1.02341449813341,0.160853921143607,0,0.308419387605311,0.177561725313127,0.657017248110473,1.55776328755086,0.464841513839837,3.14234568938218,3.80962293576241,1.47329582297434,0.459257792658427,0.910455840033585,0.786746489756545,0,0.616122696835318,0,1.46139224653261,0.844413031143006,3.4120015221269,0.170093705276516,0.863663664408557,0,0.541892875087706,0.501689773854853,1.01950509218015,0,0.223874754722178,0.219259876645935,0,1.28225062558195,0.328014645699706,0,4.12164046590889,1.92295876118521,1.56768049849117,0.574265537996172,2.6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| |||
|short_description=p3@KIF16B | |||
}} |
Revision as of 10:20, 21 January 2014
Short description: | p3@KIF16B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KIF16B_5end |
Coexpression cluster: | NA |
Association with transcript: | 104bp_to_ENST00000354981, ENST00000355755, ENST00000377997, ENST00000378003, ENST00000408042, uc002wpg.1, uc010gch.1, uc010gci.1, uc010gcj.1_5end |
EntrezGene: | KIF16B |
HGNC: | 15869 |
UniProt: | Q96L93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 6.07e-13 | 58 |
endo-epithelial cell | 1.86e-08 | 42 |
epithelial cell | 4.09e-07 | 253 |
epithelial cell of alimentary canal | 7.25e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.31e-14 | 160 |
endoderm | 3.31e-14 | 160 |
presumptive endoderm | 3.31e-14 | 160 |
digestive system | 5.51e-13 | 145 |
digestive tract | 5.51e-13 | 145 |
primitive gut | 5.51e-13 | 145 |
subdivision of digestive tract | 2.40e-11 | 118 |
gastrointestinal system | 9.46e-10 | 25 |
trunk region element | 1.97e-09 | 101 |
organ system subdivision | 8.71e-09 | 223 |
endo-epithelium | 2.85e-08 | 82 |
intestine | 3.13e-08 | 17 |
large intestine | 2.71e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.79e-12 | 143 |
carcinoma | 3.74e-10 | 106 |
cancer | 6.22e-10 | 235 |
disease of cellular proliferation | 5.13e-09 | 239 |