FFCP PHASE1:Hg19::chr21:42880002..42880042,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7113 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11876 | |||
|TSSclassifier=strong | |||
|UniProt=C9J5Y1 | |||
|association_with_transcript=0bp_to_ENST00000424093,ENST00000463138_5end | |||
|description=CAGE_peak_2_at_TMPRSS2_5end | |||
|id=chr21:42880002..42880042,- | |||
|ontology_enrichment_celltype=CL:0000039!2.20e-08!7;CL:0000586!2.20e-08!7;CL:0000223!6.02e-07!59;CL:0002322!9.62e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.65e-10;5!CL:0000039;5.12e-08;7!CL:0000586;5.12e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.35e-10,5;CL:0000039,5.78e-08,7;CL:0000586,5.78e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0006595;2.10e-10;86 | |||
|ontology_enrichment_disease=DOID:305!7.32e-12!106;DOID:0050687!3.99e-08!143;DOID:299!1.91e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.49e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.41e-09,106;DOID:299,1.38e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.96e-19!169;UBERON:0000925!1.96e-19!169;UBERON:0006595!1.96e-19!169;UBERON:0004921!3.64e-19!129;UBERON:0004185!3.64e-19!129;UBERON:0001007!7.59e-17!155;UBERON:0001555!7.59e-17!155;UBERON:0007026!7.59e-17!155;UBERON:0000466!4.26e-16!126;UBERON:0000077!1.29e-14!130;UBERON:0005911!5.09e-12!82;UBERON:0000464!7.31e-11!104;UBERON:0005177!3.03e-10!107;UBERON:0001041!3.83e-10!98;UBERON:0009569!8.19e-10!113;UBERON:0005409!2.56e-09!35;UBERON:0009497!4.59e-09!25;UBERON:0000015!4.59e-09!25;UBERON:0002423!4.59e-09!25;UBERON:0006235!4.59e-09!25;UBERON:0004161!4.59e-09!25;UBERON:0005172!6.27e-09!55;UBERON:0005173!6.27e-09!55;UBERON:0009856!1.46e-08!26;UBERON:0003929!1.77e-08!54;UBERON:0002553!1.87e-08!70;UBERON:0003135!3.15e-08!11;UBERON:0007499!7.30e-08!25;UBERON:0007023!8.00e-08!115;UBERON:0009854!1.59e-07!23;UBERON:0002530!1.88e-07!59;UBERON:0002417!2.40e-07!61;UBERON:0000916!2.40e-07!61;UBERON:0000473!2.57e-07!8;UBERON:0003101!5.55e-07!22;UBERON:0000079!5.55e-07!22;UBERON:0003104!5.66e-07!238;UBERON:0009142!5.66e-07!238;UBERON:0000160!5.80e-07!27;UBERON:0008835!7.76e-07!22;UBERON:0003894!7.76e-07!22;UBERON:0001008!7.84e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.30e-20;33!UBERON:0005409;9.37e-18;22!UBERON:0000160;2.69e-14;17!UBERON:0002108;3.95e-08;4!UBERON:0001007;5.80e-08;81!UBERON:0000922;6.50e-08;49!UBERON:0000059;1.30e-07;11!UBERON:0001041;1.43e-07;14!UBERON:0002423;3.13e-07;25!UBERON:0001555;4.41e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.44e-24,118;UBERON:0001007,1.27e-22,145;UBERON:0001555,1.27e-22,145;UBERON:0007026,1.27e-22,145;UBERON:0004119,2.08e-20,160;UBERON:0000925,2.08e-20,160;UBERON:0006595,2.08e-20,160;UBERON:0005409,2.06e-15,25;UBERON:0000160,2.01e-14,17;UBERON:0005911,1.55e-11,82;UBERON:0001041,6.14e-11,87;UBERON:0011216,8.71e-11,223;UBERON:0005177,1.37e-09,101;UBERON:0002108,2.92e-08,4;UBERON:0009569,4.15e-08,112;UBERON:0003929,7.31e-08,54;UBERON:0001046,8.61e-08,19;UBERON:0000059,1.23e-07,11;UBERON:0009497,2.96e-07,25;UBERON:0000015,2.96e-07,25;UBERON:0002423,2.96e-07,25;UBERON:0006235,2.96e-07,25;UBERON:0004161,2.96e-07,25;UBERON:0002530,4.04e-07,59;UBERON:0007499,4.94e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.96587149201207,9.07141518364156,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,1.95157929807353,1.06023814657188,1.97529702878181,1.45125477021519,2.52320850875628,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,6.87979051674338,1.77236972004421,0,2.58275720940538,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,1.69203229428271,0,0.460404944679482,0,0,0,0.902399225814824,0.385076685522074,0,0,0.316654886678627,0,0,0,0,0,0,0.509752546090077,2.49322802678617,0.447749509444357,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.97701981631236,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7898540457178,0,0,0,0,0,0.593929361665277,0,0,0,0,0,5.06700979507184,0.597743964753209,0.828851746593443,1.25966373927138,0.102268682502155,0,0,1.07842021376792,0.358042349351218,0,1.28236427328014,0,0,0,0,0,4.16684417736373,3.93569999982881,2.17499872630438,0,1.01701460117107,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0.230850775511391,0,1.1528195219403,0.0897576444097721,2.49888955420619,0.638002319463839,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,2.54435528581093,0,10.9478812418636,5.13053874119367,6.11030144933625,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,5.12959723704208,8.46935012340647,0,0,0,0,0,0,0,0,0,0,3.12407529003236,0,0,0.34945333648406,0,0,0,0,2.23074737923365,0,0.225980740780532,0.137041924646751,0,0,1.56441106187842,0.0801588202515337,5.97668385270187,0.599428828746391,3.02589876023623,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,5.82479747637269,0.236349546921671,0.164831716762333,0.337017719270924,0.590564889088493,0,0,0,1.12527203925513,1.78801267576404,1.66176135211674,0,0,0.0607495566580247,0,3.38864541386552,2.8325477592899,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,4.68967147769864,2.65013777824443,0,0,0,0,3.41719720216623,2.98688179689365,4.14239055347196,0,0,0,0,0,0,0,0,6.28216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,2.3244333569449,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,13.2857381909626,1.30953347240711,0,1.92212912082159,0.0675375846183947,0,0,0,0.546974809018219,2.74128883428591,0,0,2.8107734080711,0,0,0.606965604236632,1.36597314810779,0.354809480650555,0,0,0,0,0,1.89093383216518,1.49136876415977,0,2.80272163313789,2.73947616152849,0,0.47775168788705,0,0,0,0,0,0,0,0,4.30227358820278,0,0,7.19757985324579,0.9164274741762,0,0,0.223710863595585,2.94450700845729,2.92603019957447,0,0,0,0.485710993059139,0,0,0,1.01651473835064,0,2.8682940277668,5.40219106755613,6.99390593612663,2.35158648180761,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,2.14264726326789,0,0,6.57302749421866,2.75237570042724,0,0,0,0,3.7031878836078,0,0,0,0,0,0,1.52983244612973,3.74104367371785,0.459474497674225,3.50990555009325,0.378893491091197,0.267964130156178,0,0,1.91910583710883,0.952257725854961,0.129177819672012,0.124149428591716,0,3.6278880218554,1.41482032270754,0.435433495793923,1.36893320434112,2.28996980249598,3.01233262649241,4.32458463509817,2.44209805832924,0.106727345877715,0,0,0,0.122241444182866,0.813792356631477,1.99727032255654,0.201273793591026,0 | |||
|short_description=p2@TMPRSS2 | |||
}} |
Revision as of 13:54, 21 January 2014
Short description: | p2@TMPRSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMPRSS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424093, ENST00000463138_5end |
EntrezGene: | TMPRSS2 |
HGNC: | 11876 |
UniProt: | C9J5Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.35e-10 | 5 |
germ line cell | 5.78e-08 | 7 |
germ cell | 5.78e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.44e-24 | 118 |
digestive system | 1.27e-22 | 145 |
digestive tract | 1.27e-22 | 145 |
primitive gut | 1.27e-22 | 145 |
endoderm-derived structure | 2.08e-20 | 160 |
endoderm | 2.08e-20 | 160 |
presumptive endoderm | 2.08e-20 | 160 |
gastrointestinal system | 2.06e-15 | 25 |
intestine | 2.01e-14 | 17 |
endo-epithelium | 1.55e-11 | 82 |
foregut | 6.14e-11 | 87 |
organ system subdivision | 8.71e-11 | 223 |
trunk region element | 1.37e-09 | 101 |
small intestine | 2.92e-08 | 4 |
subdivision of trunk | 4.15e-08 | 112 |
gut epithelium | 7.31e-08 | 54 |
hindgut | 8.61e-08 | 19 |
large intestine | 1.23e-07 | 11 |
epithelium of foregut-midgut junction | 2.96e-07 | 25 |
anatomical boundary | 2.96e-07 | 25 |
hepatobiliary system | 2.96e-07 | 25 |
foregut-midgut junction | 2.96e-07 | 25 |
septum transversum | 2.96e-07 | 25 |
gland | 4.04e-07 | 59 |
epithelial sac | 4.94e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.41e-09 | 106 |
adenocarcinoma | 1.38e-07 | 25 |