FFCP PHASE1:Hg19::chr3:48488133..48488161,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84126 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33499 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WXE1,B5MEB7,F8WEI5 | |||
|association_with_transcript=0bp_to_ENST00000320211,ENST00000346691,ENST00000357105,ENST00000424906,uc011bbj.1_5end | |||
|description=CAGE_peak_2_at_ATRIP_5end | |||
|id=chr3:48488133..48488161,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.19e-16!52;CL:0000542!6.08e-16!53;CL:0000051!6.08e-16!53;CL:0000084!2.52e-11!25;CL:0000827!2.52e-11!25;CL:0000791!4.04e-10!18;CL:0000789!4.04e-10!18;CL:0002420!4.04e-10!18;CL:0002419!4.04e-10!18;CL:0000790!4.04e-10!18;CL:0000625!9.44e-08!11;CL:0000236!1.57e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.88e-11;25!CL:0000791;4.01e-10;18!CL:0000789;4.01e-10;18!CL:0002419;4.01e-10;18!CL:0000542;4.09e-10;53!CL:0000236;5.69e-08;13!CL:0000625;6.87e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.19e-16,52;CL:0000542,6.06e-16,53;CL:0000051,6.06e-16,53;CL:0000084,2.51e-11,25;CL:0000827,2.51e-11,25;CL:0000791,4.03e-10,18;CL:0000789,4.03e-10,18;CL:0002420,4.03e-10,18;CL:0002419,4.03e-10,18;CL:0000790,4.03e-10,18;CL:0000625,9.43e-08,11;CL:0000236,1.57e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;4.01e-10;18!CL:0000051;4.09e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.56e-07,114 | |||
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| |||
|short_description=p2@ATRIP | |||
}} |
Revision as of 18:47, 21 January 2014
Short description: | p2@ATRIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATRIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320211, ENST00000346691, ENST00000357105, ENST00000424906, uc011bbj.1_5end |
EntrezGene: | ATRIP |
HGNC: | 33499 |
UniProt: | Q8WXE1B5MEB7F8WEI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.19e-16 | 52 |
lymphocyte | 6.06e-16 | 53 |
common lymphoid progenitor | 6.06e-16 | 53 |
T cell | 2.51e-11 | 25 |
pro-T cell | 2.51e-11 | 25 |
mature alpha-beta T cell | 4.03e-10 | 18 |
alpha-beta T cell | 4.03e-10 | 18 |
immature T cell | 4.03e-10 | 18 |
mature T cell | 4.03e-10 | 18 |
immature alpha-beta T cell | 4.03e-10 | 18 |
CD8-positive, alpha-beta T cell | 9.43e-08 | 11 |
B cell | 1.57e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.56e-07 | 114 |