FFCP PHASE1:Hg19::chr4:77703384..77703397,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:77703384..77703397,+ | |||
|id=chr4:77703384..77703397,+ | |||
|ontology_enrichment_celltype=CL:0000057!8.17e-14!75;CL:0002620!9.85e-14!23;CL:0000055!2.73e-12!180;CL:0000548!1.83e-07!679;CL:0000004!1.83e-07!679;CL:0000255!1.83e-07!679;CL:0000012!2.53e-07!682;CL:0000144!5.81e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000222;3.99e-50;1!CL:1000306;8.81e-14;4!CL:0002547;8.81e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,8.82e-14,4;CL:0002547,8.82e-14,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.63e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:17;3.26e-11;5!DOID:450;3.26e-11;5!DOID:66;3.26e-11;5!DOID:423;3.26e-11;5!DOID:0080000;3.26e-11;5!DOID:11722;3.26e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.60e-11,5;DOID:450,3.60e-11,5;DOID:66,3.60e-11,5;DOID:423,3.60e-11,5;DOID:0080000,3.60e-11,5;DOID:11722,3.60e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.30e-07!40;UBERON:0003102!1.43e-07!95;UBERON:0002199!2.44e-07!45;UBERON:0002416!2.44e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;8.81e-14;4!UBERON:0000415;8.81e-14;4!UBERON:0007240;8.81e-14;4!UBERON:0005742;8.81e-14;4!UBERON:0005734;8.81e-14;4!UBERON:0004664;8.81e-14;4!UBERON:0004663;8.81e-14;4!UBERON:0000947;1.61e-10;21!UBERON:0010191;1.61e-10;21!UBERON:0004573;3.48e-07;33!UBERON:0004571;3.48e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,8.82e-14,4;UBERON:0007240,8.82e-14,4;UBERON:0005742,8.82e-14,4;UBERON:0005734,8.82e-14,4;UBERON:0004664,8.82e-14,4;UBERON:0004663,8.82e-14,4;UBERON:0000947,1.61e-10,21;UBERON:0010191,1.61e-10,21;UBERON:0004797,1.89e-08,7;UBERON:0004573,4.60e-07,33;UBERON:0004571,4.60e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,3.44263870114369,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0.576175924479999,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.113432183160021,0.538168907066586,0.213557388818567,0,1.20036438433761,0.103052529238439,0.515281080091258,0.18611685633159,0.843881661206331,0.194874010322397,0.757301322732344,0,0,0.710019185033229,0,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.630809660135739,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.601519410909855,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.382838137483752,0,0,1.25924938732256,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0.731140468893853,0,0,0.424216295861138,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0.286822704408103,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435296032902013,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0.14405479798815,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0.50313580350515,0,0.228840068396924,0,0,0,0.477890301491107,0,0.155262956876259,0,0.53168342911599,0,0.150257608997218,0.761610424337591,0,0,0.322231671127465,0.464033759878494,0.398095888698616,0.400027764663154,0.343395705182793,0,1.26184898228651,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:77703384..77703397,+ | |||
}} |
Revision as of 01:44, 22 January 2014
Short description: | p@chr4:77703384..77703397, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:77703384..77703397, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 8.82e-14 | 4 |
fibroblast of the aortic adventitia | 8.82e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 8.82e-14 | 4 |
tunica adventitia of artery | 8.82e-14 | 4 |
adventitia | 8.82e-14 | 4 |
tunica adventitia of blood vessel | 8.82e-14 | 4 |
aorta tunica adventitia | 8.82e-14 | 4 |
aorta wall | 8.82e-14 | 4 |
aorta | 1.61e-10 | 21 |
aortic system | 1.61e-10 | 21 |
blood vessel layer | 1.89e-08 | 7 |
systemic artery | 4.60e-07 | 33 |
systemic arterial system | 4.60e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.60e-11 | 5 |
myotonic disease | 3.60e-11 | 5 |
muscle tissue disease | 3.60e-11 | 5 |
myopathy | 3.60e-11 | 5 |
muscular disease | 3.60e-11 | 5 |
myotonic dystrophy | 3.60e-11 | 5 |