FFCP PHASE1:Hg19::chr4:118954422..118954433,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9348 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7682 | |||
|TSSclassifier=not | |||
|UniProt=O95803 | |||
|association_with_transcript=-339bp_to_ENST00000394488,uc003ibw.2_5end | |||
|description=CAGE_peak_7_at_NDST3_5end | |||
|id=chr4:118954422..118954433,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;4.27e-34;1!UBERON:0006215;2.45e-12;3!UBERON:0006601;9.07e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.45e-39!57;UBERON:0005068!2.45e-39!57;UBERON:0006241!2.45e-39!57;UBERON:0007135!2.45e-39!57;UBERON:0000955!3.95e-38!69;UBERON:0006238!3.95e-38!69;UBERON:0002616!9.62e-38!59;UBERON:0001017!1.55e-37!82;UBERON:0005743!1.66e-37!86;UBERON:0003075!1.89e-35!86;UBERON:0007284!1.89e-35!86;UBERON:0000073!4.02e-35!94;UBERON:0001016!4.02e-35!94;UBERON:0001893!1.54e-33!34;UBERON:0002346!1.85e-33!90;UBERON:0001869!1.09e-32!32;UBERON:0002791!3.16e-31!33;UBERON:0002020!2.98e-30!34;UBERON:0003528!2.98e-30!34;UBERON:0002780!5.44e-30!41;UBERON:0001890!5.44e-30!41;UBERON:0006240!5.44e-30!41;UBERON:0000153!8.99e-30!129;UBERON:0007811!8.99e-30!129;UBERON:0003080!3.79e-29!42;UBERON:0000033!2.87e-28!123;UBERON:0002619!6.91e-27!22;UBERON:0003056!2.68e-26!61;UBERON:0001950!6.15e-26!20;UBERON:0004121!5.47e-24!169;UBERON:0000956!2.54e-23!25;UBERON:0000203!2.54e-23!25;UBERON:0000924!3.51e-23!173;UBERON:0006601!3.51e-23!173;UBERON:0007023!4.46e-23!115;UBERON:0002680!4.16e-15!9;UBERON:0001895!4.16e-15!9;UBERON:0010092!4.16e-15!9;UBERON:0004733!3.13e-14!12;UBERON:0002028!3.13e-14!12;UBERON:0007277!3.13e-14!12;UBERON:0001871!1.55e-13!7;UBERON:0004732!5.00e-13!13;UBERON:0000369!5.45e-13!4;UBERON:0002435!5.45e-13!4;UBERON:0000204!5.45e-13!4;UBERON:0010082!5.45e-13!4;UBERON:0000200!6.89e-13!6;UBERON:0002037!1.83e-12!6;UBERON:0006215!1.83e-12!6;UBERON:0003076!4.18e-11!15;UBERON:0003057!4.18e-11!15;UBERON:0000064!1.17e-10!219;UBERON:0005383!3.11e-10!3;UBERON:0005382!3.11e-10!3;UBERON:0002021!4.16e-10!5;UBERON:0002771!7.69e-10!3;UBERON:0002420!1.34e-08!9;UBERON:0007245!1.34e-08!9;UBERON:0010009!1.34e-08!9;UBERON:0010011!1.34e-08!9;UBERON:0000454!1.34e-08!9;UBERON:0002308!2.45e-08!9;UBERON:0000125!2.45e-08!9;UBERON:0001873!1.89e-07!2;UBERON:0010122!1.89e-07!2;UBERON:0009663!2.12e-07!7;UBERON:0000475!4.49e-07!365;UBERON:0002360!5.18e-07!2;UBERON:0000094!5.18e-07!2;UBERON:0007645!5.18e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002360;8.34e-18;2!UBERON:0000094;8.34e-18;2!UBERON:0010743;8.34e-18;2!UBERON:0001017;1.35e-07;75!UBERON:0002037;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002360,1.07e-17,2;UBERON:0000094,1.07e-17,2;UBERON:0010743,1.07e-17,2;UBERON:0001017,2.09e-10,81;UBERON:0001016,1.98e-09,89;UBERON:0000955,4.00e-08,68;UBERON:0006238,4.00e-08,68;UBERON:0007023,1.11e-07,114;UBERON:0002037,7.58e-07,6;UBERON:0006215,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598390910176,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0,0,0.689486746482929,0,0.868124974666461,0.885741385813839,0.482385754501632,1.52581736317083,0.552896299656123,0.295547618953547,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0,0.124192805882767,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.159633859057151,0.41023272848151,0.756215088665154,0.691572524642179,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.789273282754189,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,1.01987235286372,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@NDST3 | |||
}} |
Revision as of 02:52, 22 January 2014
Short description: | p7@NDST3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NDST3_5end |
Coexpression cluster: | NA |
Association with transcript: | -339bp_to_ENST00000394488, uc003ibw.2_5end |
EntrezGene: | NDST3 |
HGNC: | 7682 |
UniProt: | O95803 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meninx | 1.07e-17 | 2 |
membrane organ | 1.07e-17 | 2 |
meningeal cluster | 1.07e-17 | 2 |
central nervous system | 2.09e-10 | 81 |
nervous system | 1.98e-09 | 89 |
brain | 4.00e-08 | 68 |
future brain | 4.00e-08 | 68 |
adult organism | 1.11e-07 | 114 |
cerebellum | 7.58e-07 | 6 |
rhombic lip | 7.58e-07 | 6 |