FFCP PHASE1:Hg19::chr5:77944686..77944738,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10184 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6588 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000512759_5end | |||
|description=CAGE_peak_3_at_LHFPL2_5end | |||
|id=chr5:77944686..77944738,- | |||
|ontology_enrichment_celltype=CL:0002321!4.98e-13!248;CL:0000220!5.67e-13!246;CL:0000055!1.99e-10!180;CL:0000222!2.33e-09!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.66e-13,250;CL:0000222,9.90e-10,121;CL:0000187,9.79e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.29e-10!79;UBERON:0007798!2.29e-10!79;UBERON:0004872!2.80e-10!84;UBERON:0003914!4.13e-09!118;UBERON:0000490!1.56e-08!138;UBERON:0000922!4.72e-08!612;UBERON:0000119!5.06e-08!312;UBERON:0000055!5.25e-08!69;UBERON:0004111!6.41e-08!241;UBERON:0001981!6.81e-08!60;UBERON:0007500!6.81e-08!60;UBERON:0004537!6.81e-08!60;UBERON:0006965!6.81e-08!60;UBERON:0000483!8.27e-08!309;UBERON:0000477!8.33e-08!286;UBERON:0000468!1.01e-07!659;UBERON:0002100!1.48e-07!216;UBERON:0002050!2.16e-07!605;UBERON:0005423!2.16e-07!605;UBERON:0000467!2.78e-07!625;UBERON:0000481!2.79e-07!347;UBERON:0004535!3.69e-07!110;UBERON:0001009!3.70e-07!113;UBERON:0000923!3.99e-07!604;UBERON:0005291!3.99e-07!604;UBERON:0006598!3.99e-07!604;UBERON:0002532!3.99e-07!604;UBERON:0000480!4.13e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.88e-10,78;UBERON:0007798,2.88e-10,78;UBERON:0004872,3.53e-10,83;UBERON:0003914,8.32e-09,117;UBERON:0000490,1.44e-08,148;UBERON:0000055,6.60e-08,68;UBERON:0002100,7.29e-08,199;UBERON:0005256,8.00e-08,122;UBERON:0007500,8.56e-08,59;UBERON:0001981,8.56e-08,59;UBERON:0004537,8.56e-08,59;UBERON:0006965,8.56e-08,59;UBERON:0002553,1.84e-07,61;UBERON:0004111,2.57e-07,240;UBERON:0000119,3.20e-07,309;UBERON:0003104,4.74e-07,160;UBERON:0009142,4.74e-07,160;UBERON:0000483,5.09e-07,306;UBERON:0001009,5.80e-07,112;UBERON:0004535,5.82e-07,109 | |||
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| |||
|short_description=p3@LHFPL2 | |||
}} |
Revision as of 06:07, 22 January 2014
Short description: | p3@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LHFPL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000512759_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.66e-13 | 250 |
mesodermal cell | 9.90e-10 | 121 |
muscle cell | 9.79e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.88e-10 | 78 |
vascular system | 2.88e-10 | 78 |
splanchnic layer of lateral plate mesoderm | 3.53e-10 | 83 |
epithelial tube | 8.32e-09 | 117 |
unilaminar epithelium | 1.44e-08 | 148 |
vessel | 6.60e-08 | 68 |
trunk | 7.29e-08 | 199 |
trunk mesenchyme | 8.00e-08 | 122 |
epithelial tube open at both ends | 8.56e-08 | 59 |
blood vessel | 8.56e-08 | 59 |
blood vasculature | 8.56e-08 | 59 |
vascular cord | 8.56e-08 | 59 |
anatomical cavity | 1.84e-07 | 61 |
anatomical conduit | 2.57e-07 | 240 |
cell layer | 3.20e-07 | 309 |
mesenchyme | 4.74e-07 | 160 |
entire embryonic mesenchyme | 4.74e-07 | 160 |
epithelium | 5.09e-07 | 306 |
circulatory system | 5.80e-07 | 112 |
cardiovascular system | 5.82e-07 | 109 |