FFCP PHASE1:Hg19::chr5:92923453..92923465,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:92923453..92923465,+ | |||
|id=chr5:92923453..92923465,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000708;5.73e-18;3!CL:0002600;4.39e-13;2!CL:0002598;6.11e-13;2!CL:0002195;1.45e-12;2!CL:0002571;1.45e-12;2!CL:0000342;1.68e-07;1!CL:0002565;1.68e-07;1!CL:0002601;4.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,1.23e-17,3;CL:0002598,3.90e-13,2;CL:0002600,4.68e-13,2;CL:0002195,1.22e-12,2;CL:0002571,1.22e-12,2;CL:0000342,1.54e-07,1;CL:0002565,1.54e-07,1;CL:0002601,6.97e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006222;4.08e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.02e-14!86;UBERON:0007284!2.02e-14!86;UBERON:0002346!3.11e-13!90;UBERON:0000033!1.47e-12!123;UBERON:0000119!2.10e-12!312;UBERON:0000073!5.69e-12!94;UBERON:0001016!5.69e-12!94;UBERON:0005743!8.35e-12!86;UBERON:0000475!2.20e-11!365;UBERON:0000153!2.49e-11!129;UBERON:0007811!2.49e-11!129;UBERON:0002616!3.08e-11!59;UBERON:0000483!5.67e-11!309;UBERON:0000481!1.20e-10!347;UBERON:0002200!1.85e-10!11;UBERON:0006876!1.85e-10!11;UBERON:0003056!4.56e-10!61;UBERON:0000955!9.61e-10!69;UBERON:0006238!9.61e-10!69;UBERON:0001017!1.67e-09!82;UBERON:0004121!6.61e-09!169;UBERON:0007625!9.49e-09!11;UBERON:0000064!1.53e-08!219;UBERON:0000924!2.24e-08!173;UBERON:0006601!2.24e-08!173;UBERON:0000970!2.56e-08!20;UBERON:0001049!4.01e-08!57;UBERON:0005068!4.01e-08!57;UBERON:0006241!4.01e-08!57;UBERON:0007135!4.01e-08!57;UBERON:0001456!6.35e-08!21;UBERON:0002104!9.35e-08!21;UBERON:0000477!1.05e-07!286;UBERON:0000019!1.27e-07!19;UBERON:0000047!1.27e-07!19;UBERON:0004088!1.27e-07!19;UBERON:0003072!1.27e-07!19;UBERON:0003071!1.27e-07!19;UBERON:0004128!1.27e-07!19;UBERON:0000062!2.88e-07!511;UBERON:0000020!8.71e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;5.73e-18;3!UBERON:0002506;1.68e-07;1!UBERON:0001769;1.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.23e-17,3;UBERON:0002506,1.54e-07,1;UBERON:0001769,1.54e-07,1;UBERON:0005177,1.90e-07,101 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0.369363174230364,1.42800483870977,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0.454072282934794,0.576175924479999,0.468642863667593,0,0,0,0,0,0,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0.910161361938026,1.43723628363248,0,0.125118519871964,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0,0,0,2.57351715447788,0,0,0,0,0.325808305310325,0,0,0.927443239800615,1.6437217193015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12131084345361,1.30788020649984,1.24675085895615,0,0,0,0,0,0,0,0,1.14382394926518,5.42621605391443,0.823240336780769,0,1.77695974371273,0,1.50719688529793,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.459257792658427,0.364182336013434,1.96686622439136,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0,0.647747748306418,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0.671624264166535,0,0,2.3080511260475,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0.762520775695299,2.55897791311334,1.71175595213568,0.95460974377781,0,0.539617372749944,0.823611089208164,0.824686816419805,0,0,0,0,0,0,0.545999645631943,0.424216295861138,0,0,0,0,3.47265320560013,1.31178950409327,0,0,0,0.717056761020258,0.392996164052485,0,1.06428319221179,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24330549367694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51945513073589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,3.05163472634166,0.552896299656123,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,1.40558667435203,0,0,0,0,0,0.91821828489147,0.126373159256976,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0,0,0,0,0,0.0969890164884194,0.353024506766001,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,1.71804894248874,0,0,0,0,0,0,0.713987523454252,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0.209818352539992,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.796483835818512,0.899606224327209,0,1.24411862352257,0,0.521745061811734,0.450772826991655,2.66563648518157,0.813741466409323,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.906823702049089,0.231522474323834,0,0.537266523244462,0,0.219284049578707,2.12026975135057,0.578742114812744,1.01365464391844,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0,0.078493092850514,0,0,0,1.29556554731173,0.9555033757741,0.357382720883282,0,2.09234565662625,0,0.801711364730253,0,0,0,0,0.709992004383392,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,4.51896344954761,0,0,0,0,0,0,0.245148321753905,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0.829169439458779,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr5:92923453..92923465,+ | |||
}} |
Revision as of 06:30, 22 January 2014
Short description: | p@chr5:92923453..92923465, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:92923453..92923465, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 1.23e-17 | 3 |
bronchial smooth muscle cell | 3.90e-13 | 2 |
smooth muscle cell of trachea | 4.68e-13 | 2 |
hepatic stem cell | 1.22e-12 | 2 |
hepatic mesenchymal stem cell | 1.22e-12 | 2 |
pigment cell (sensu Vertebrata) | 1.54e-07 | 1 |
iris pigment epithelial cell | 1.54e-07 | 1 |
uterine smooth muscle cell | 6.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 1.23e-17 | 3 |
iris epithelium | 1.54e-07 | 1 |
iris | 1.54e-07 | 1 |
trunk region element | 1.90e-07 | 101 |