FFCP PHASE1:Hg19::chr5:125198967..125198968,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:125198967..125198968,+ | |||
|id=chr5:125198967..125198968,+ | |||
|ontology_enrichment_celltype=CL:0000317!1.61e-08!2;CL:1000448!1.61e-08!2;CL:0002308!1.61e-08!2;CL:0002140!1.61e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002569;1.44e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,1.44e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002426!6.44e-16!1;UBERON:0003831!6.44e-16!1;UBERON:0003898!6.44e-16!1;UBERON:0004830!6.44e-16!1;UBERON:0001774!6.44e-16!1;UBERON:0003830!6.44e-16!1;UBERON:0005175!6.44e-16!1;UBERON:0003897!6.44e-16!1;UBERON:0001103!6.44e-16!1;UBERON:0010084!6.44e-16!1;UBERON:0002135!1.34e-15!1;UBERON:0001630!1.29e-08!2;UBERON:0005090!1.29e-08!2;UBERON:0002419!1.61e-08!2;UBERON:0007771!1.61e-08!2;UBERON:0003297!1.61e-08!2;UBERON:0001821!1.61e-08!2;UBERON:0003487!1.61e-08!2;UBERON:0001820!1.61e-08!2;UBERON:0005089!1.61e-08!2;UBERON:0005088!1.61e-08!2;UBERON:0002133!1.86e-08!2;UBERON:0001897!2.87e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;3.99e-50;1!UBERON:0003831;3.99e-50;1!UBERON:0003898;3.99e-50;1!UBERON:0004830;3.99e-50;1!UBERON:0003830;3.99e-50;1!UBERON:0005175;3.99e-50;1!UBERON:0001774;3.99e-50;1!UBERON:0001103;3.99e-50;1!UBERON:0005090;7.14e-26;2!UBERON:0001630;7.14e-26;2!UBERON:0002114;9.45e-18;2!UBERON:0002108;3.26e-11;4!UBERON:0003422;1.44e-09;6!UBERON:0003104;2.18e-08;7!UBERON:0009142;2.18e-08;7!UBERON:0002385;1.13e-07;31!UBERON:0001015;1.13e-07;31!UBERON:0000383;1.13e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.42e-50,1;UBERON:0003831,2.42e-50,1;UBERON:0003898,2.42e-50,1;UBERON:0004830,2.42e-50,1;UBERON:0003830,2.42e-50,1;UBERON:0005175,2.42e-50,1;UBERON:0001774,2.42e-50,1;UBERON:0001103,2.42e-50,1;UBERON:0010084,2.42e-50,1;UBERON:0005090,5.56e-26,2;UBERON:0001630,5.56e-26,2;UBERON:0002114,1.12e-17,2;UBERON:0002108,3.60e-11,4;UBERON:0003422,1.44e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46293581513704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:125198967..125198968,+ | |||
}} |
Revision as of 07:08, 22 January 2014
Short description: | p@chr5:125198967..125198968, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr5:125198967..125198968, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 2.42e-50 | 1 |
respiratory system muscle | 2.42e-50 | 1 |
skeletal muscle of trunk | 2.42e-50 | 1 |
respiratory system skeletal muscle | 2.42e-50 | 1 |
thoracic segment muscle | 2.42e-50 | 1 |
chest organ | 2.42e-50 | 1 |
muscle of trunk | 2.42e-50 | 1 |
diaphragm | 2.42e-50 | 1 |
future diaphragm | 2.42e-50 | 1 |
muscle structure | 5.56e-26 | 2 |
muscle organ | 5.56e-26 | 2 |
duodenum | 1.12e-17 | 2 |
small intestine | 3.60e-11 | 4 |
mesenchyme of umbilical cord | 1.44e-09 | 6 |