FFCP PHASE1:Hg19::chr6:87832471..87832472,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=39205 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-65bp_to_ENST00000400413_5end | |||
|description=CAGE_peak_1_at_RCN1P1_5end | |||
|id=chr6:87832471..87832472,- | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-17!180;CL:0000057!1.71e-13!75;CL:0000548!3.27e-11!679;CL:0000004!3.27e-11!679;CL:0000255!3.27e-11!679;CL:0000012!4.26e-11!682;CL:0000222!1.73e-09!119;CL:0002321!6.64e-09!248;CL:0000220!8.84e-09!246;CL:0000144!3.71e-08!625;CL:0002620!1.14e-07!23;CL:0002371!2.53e-07!591;CL:0000680!4.60e-07!57;CL:0000056!4.60e-07!57;CL:0000355!4.60e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000048;1.98e-07;58!CL:0002570;2.98e-07;8!CL:0000723;3.94e-07;61!CL:0000134;5.17e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.82e-08,427;CL:0000723,8.03e-08,433;CL:0000034,2.08e-07,441;CL:0002570,4.38e-07,8;CL:0000136,5.10e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.46e-08;5!DOID:450;7.46e-08;5!DOID:66;7.46e-08;5!DOID:423;7.46e-08;5!DOID:0080000;7.46e-08;5!DOID:11722;7.46e-08;5!DOID:2394;1.10e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.78e-08,5;DOID:450,3.78e-08,5;DOID:66,3.78e-08,5;DOID:423,3.78e-08,5;DOID:0080000,3.78e-08,5;DOID:11722,3.78e-08,5;DOID:2394,1.39e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!1.57e-07!70;UBERON:0002199!1.74e-07!45;UBERON:0002416!1.74e-07!45;UBERON:0000490!2.79e-07!138;UBERON:0000914!3.96e-07!83;UBERON:0002329!3.96e-07!83;UBERON:0003077!3.96e-07!83;UBERON:0003059!3.96e-07!83;UBERON:0007282!3.96e-07!83;UBERON:0009618!3.96e-07!83;UBERON:0007285!3.96e-07!83;UBERON:0002049!4.98e-07!79;UBERON:0007798!4.98e-07!79;UBERON:0000055!6.07e-07!69;UBERON:0002100!6.20e-07!216;UBERON:0003102!6.41e-07!95;UBERON:0005256!6.42e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.15e-09;14!UBERON:0001637;1.76e-07;42!UBERON:0003509;1.76e-07;42!UBERON:0004572;1.76e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,9.17e-10,14;UBERON:0000055,1.12e-08,68;UBERON:0001637,7.49e-08,42;UBERON:0003509,7.49e-08,42;UBERON:0004572,7.49e-08,42;UBERON:0004872,5.04e-07,83;UBERON:0002049,5.81e-07,78;UBERON:0007798,5.81e-07,78 | |||
|phase1_expression=1.45342703416445,0.428201047781966,1.69145284915165,0,1.34088328328186,0.872338524100369,2.53299878168311,1.89515962028049,0.522371256399677,0.491467873003018,0,0.436882744260345,0,0,0.331397375727916,2.01697543935533,0.602694528023977,2.92124036154949,0.487932798790507,0.369363174230364,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.152826811495903,0.246301768349837,0.314843125254717,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,1.80719576192283,1.00267582127178,0.579386075843295,0,0.486634870302636,0.567208902984407,0.443458794925128,0.263504357079378,0,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.38856200643038,0.56530794192401,0,1.10047216776027,0.626984899610432,0.516833518338658,1.06729878806013,2.00832367658802,0.805658634218294,0,0.488124115096339,1.10298924103761,0,0.446498641420399,1.12264686313085,0.337834441449967,0,0.949265659568129,0.366403487860815,0,0,0,0.496971951695318,1.01304409331664,0.397227542439656,2.29469296599051,0,1.68203280042692,1.06748995729705,0.49333509683432,0.622422070799533,0.404132016209064,0.163461903113459,0.302714855289863,0.576175924479999,0.937285727335186,0.624320153660641,0.570471821544449,0.597794722207204,0.352303495931295,0.647491777472526,0.421352420106746,1.02077085627447,0.245668634623536,0.206651562351531,0,0.741800787835671,1.82032272387605,0,0.336672227908132,0,0.554128230968366,0.877955241761676,0,0.600952235626387,1.13432183160021,1.61450672119976,1.2813443329114,1.48352330811693,2.70081986475962,0.515262646192195,1.03056216018252,0.558350568994769,1.68776332241266,0.876933046450788,1.00973509697646,0.644349290496095,0.161646056818812,2.84007674013291,0.503760491138201,0.339121184620975,0.193260853163297,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.207322110030741,0.252320850875628,1.09493207722749,4.69348596989448,0.643240938192885,0,1.39310378409594,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0.474541238222193,0.808987848960987,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0.370353780634118,0.651616610620649,0,0,0.579652024875384,1.17408694235822,1.44366447761074,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0.2933531432838,0.775630294546667,3.57656445851882,0,0,0,0.771622122786426,2.83698264046557,0.266422179016099,1.14382394926518,1.62786481617433,0.823240336780769,0.977208552881205,0.710783897485092,1.58390374586686,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0.958499421966331,0,1.42636905040718,0.579125226670317,1.2328579353023,0.537182889719687,0.224170287987055,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0.713715955188647,0.788512075169673,0.819989904948992,0.601892199455438,0,0,0.664225598535437,0.553107505625109,0.781952530212746,0.195801157462741,0,0,0,0,0,1.66435439510497,0,0.248107807818777,0.61384789315225,0.280660094433074,0.768834895534206,1.53512174720011,0.482561763430822,1.48418066444991,0.771048469013278,1.24293207719189,0.574890092096664,0.519254429183621,0.348631135379878,0.604297247958111,0.601519410909855,0.184161977871793,0.68888668898764,1.63882051206045,0.393373244878272,0,0.231046011313244,0.784349769176855,0,0.316654886678627,2.27466768141793,0.340187410553031,0.863663664408557,0,0,0,0.254876273045038,0,0.447749509444357,0.219259876645935,0,0.256450125116389,0.328014645699706,0.325378394664303,0.309123034943167,0.183138929636687,0,0,0,0,0.290012154876366,0.770243085573222,0.307007349452259,0.275673144969061,0.966782203814463,0.435050081742686,0.170453254832202,0.445160178233687,0.165284915360978,0.960950336825531,0,0.50578890427775,0,2.83331112147576,0.6970372701606,0.308033580176089,1.06461206063404,0,0.18532421910392,0.429374660225974,0,0,0.38126038784765,0.255897791311334,0.42793898803392,0.636406495851874,0,0.899362287916574,0.823611089208164,0.235624804691373,0.606547444719948,0,0,0.975267478179181,2.19342140668156,0,0.818999468447914,1.1312434556297,2.26016233240486,0.551365343546124,1.99031692572366,1.31535265576129,0,0.655894752046633,0.608731130888112,0.6196469961995,0,0.717056761020258,1.08073945114433,0,0,0.633322905892992,0.658589785919804,0.379473173765715,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.0941438007767792,1.29151611801369,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0.37428108081644,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.333926115068718,0.16480387422676,0,0,0,0,0.613612095012929,0.123084805461069,0.933118762985422,0.988551862620595,0.179021174675609,0,0.295930216910801,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,13.1954996149302,0,0,1.52581736317083,0,0,0,0.762569244632931,0.41827123283581,0,0,0.922255617552241,0.628303510868405,0,0.638002319463839,0.549585560411174,2.13213910407454,0,0,0,0,0,0,0.189753732724185,0,0.632994193584081,1.30586246527318,0.424059214301822,0,0,0.265372693510018,0,0.296521128680622,0.123563938946503,0.208843899010911,0.134802265961354,0,0,0,0.391329237864179,0.728341138602278,0,1.20990716048664,0,0,0.150323419414493,0.207376382794494,0,0.330991955875499,0,0,0.569219092059585,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0.171986032471617,0.387025325156341,0.365446585430928,0.574808199372465,0,0.529536760149002,0.451961481561065,0.411125773940253,0.596143835108969,0,0,0.801588202515337,0.213452994739353,0,0.576361668616424,0.687219576995494,0.857974989309823,0.14405479798815,0.372757606696298,0,0,0,1.52997326454483,0.288950589901519,0,0.136905378891993,0,0.859530882839914,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0.720599767084807,1.16495949527454,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.492137407573744,0.0846733320657845,0,0.136203406111576,0.160753148465019,0,0,0,0,0.121499113316049,0,0,0.262272940674991,1.26720403823288,0.537862017998534,0.191915197319445,0,0,0.25426853765475,2.17199840701485,0.864221491201268,0.979762080328227,0,0,0.511164065356265,0.453248366080503,0,0,0,0,1.19760786519031,0.704815022316672,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0.276697269872462,0,0.303298235083296,0.570930667089935,0,0,0,0.74627401443437,1.16856654923612,1.10961172300523,0.568209015825267,0,0.889811221596536,1.60188047877847,1.05861646634267,0.932623203496683,0.443565449968902,0.477890301491107,2.24901556081802,0.465788870628778,1.24411862352257,0.265841714557995,1.04349012362347,0.300515217994437,1.52322084867518,1.22061219961398,0.363697318405119,0.751873899297419,3.24823631914946,2.3885753321917,0,1.71697852591396,1.01024846629776,0,0,0.643324774124777,0.521988583930423,0.680117776536817,0.231522474323834,1.22368352253234,0,0,0.219284049578707,0.883445729729405,0.38582807654183,0.168942440653073,0,0,1.51929978088691,0,0.194860308839388,0,0.490696182767533,0.327609848846413,0,0.211312123358627,0,0,0.172214979660816,0,0.184105950251841,0.139879507719444,0.622077260032973,0.127894371303652,0.107824811396682,0,0,0,0,0.123935764259002,0,0.636008701306837,0.157723490002507,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.183428598521679,0,1.1441462864015,0.690359926060101,0.397832444232549,0,1.0085253435176,0,0.261906694481422,0.982631505060581,0,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.766574565837572,0.535701835878287,0,0,0.227662191351298,0.532214220975833,0,1.54339208493677,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0.647782773655864,0,0,0.158013611732727,0.23248285073625,0.521574816907738,0,0,0,0.691259661814092,0.430227358820278,0.118332000730565,0.255640214277473,0.846774100381858,0.4582137370881,0,0.955538938977433,0.335566295393377,0.196300467230486,0.365753774946808,0,0.205325613712494,0,0,0.233939463462106,0.994753875806841,0.951360726220549,0.33883824611688,0,0.603851374266694,0.0771741581079447,0,0,0.245148321753905,0.471353094203252,0.196308467114945,0,0,0.849635573439084,0.0939839179798536,0.0644578879735772,0.299823467774787,0.357107877211315,0,0.0802413666891683,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,0,0.743990036333503,0.924351257262837,0.865253124247578,0.126166424835079,0.109265571963696,0.126698501011437,0.203977659483963,0,0.643264296743914,0,0.151557396436479,0,0,0.20686599172379,0,0,0,0,0.224263725161227,0.12729431655633,0,0,0,0.134704106029175,0.143444410785353,0,0.407016343054873,0,0,0.269475606319761,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@RCN1P1 | |||
}} |
Revision as of 12:55, 22 January 2014
Short description: | p1@RCN1P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RCN1P1_5end |
Coexpression cluster: | NA |
Association with transcript: | -65bp_to_ENST00000400413_5end |
EntrezGene: | NA |
HGNC: | 39205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.82e-08 | 427 |
somatic stem cell | 8.03e-08 | 433 |
stem cell | 2.08e-07 | 441 |
mesenchymal stem cell of adipose | 4.38e-07 | 8 |
fat cell | 5.10e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 9.17e-10 | 14 |
vessel | 1.12e-08 | 68 |
artery | 7.49e-08 | 42 |
arterial blood vessel | 7.49e-08 | 42 |
arterial system | 7.49e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 5.04e-07 | 83 |
vasculature | 5.81e-07 | 78 |
vascular system | 5.81e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.78e-08 | 5 |
myotonic disease | 3.78e-08 | 5 |
muscle tissue disease | 3.78e-08 | 5 |
myopathy | 3.78e-08 | 5 |
muscular disease | 3.78e-08 | 5 |
myotonic dystrophy | 3.78e-08 | 5 |
ovarian cancer | 1.39e-07 | 14 |