FFCP PHASE1:Hg19::chr7:15707836..15707857,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=264bp_to_ENST00000451240,uc003ste.2_5end | |||
|coexpression_cluster_id=C794 | |||
|description=CAGE_peak_1_at_ENST00000451240_5end,CAGE_peak_1_at_uc003ste.2_5end | |||
|id=chr7:15707836..15707857,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.07e-08!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.97e-19;1!UBERON:0003056;2.71e-07;3 | |||
|ontology_enrichment_disease=DOID:3371!4.91e-09!1;DOID:4549!4.91e-09!1;DOID:5861!4.91e-09!1;DOID:6496!4.91e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.89e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.89e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!2.56e-21!27;UBERON:0000059!1.99e-17!11;UBERON:0005409!2.78e-16!35;UBERON:0004907!2.20e-14!5;UBERON:0001155!6.14e-14!9;UBERON:0002134!4.19e-09!1;UBERON:0005208!4.19e-09!1;UBERON:0005946!4.19e-09!1;UBERON:0005965!4.19e-09!1;UBERON:0002078!4.19e-09!1;UBERON:0001154!6.22e-09!1;UBERON:0001153!6.22e-09!1;UBERON:0001242!1.07e-08!4;UBERON:0001262!1.07e-08!4;UBERON:0004786!1.07e-08!4;UBERON:0004808!1.07e-08!4;UBERON:0001277!1.07e-08!4;UBERON:0001052!1.21e-08!4;UBERON:0002370!1.98e-08!4;UBERON:0005058!1.98e-08!4;UBERON:0009113!1.98e-08!4;UBERON:0003295!1.98e-08!4;UBERON:0005562!1.98e-08!4;UBERON:0004921!1.03e-07!129;UBERON:0004185!1.03e-07!129;UBERON:0001007!3.58e-07!155;UBERON:0001555!3.58e-07!155;UBERON:0007026!3.58e-07!155;UBERON:0003350!4.04e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.01e-35;17!UBERON:0002108;2.00e-33;4!UBERON:0005409;5.68e-28;22!UBERON:0004921;4.04e-17;33!UBERON:0001155;7.45e-09;9!UBERON:0001555;1.68e-07;54!UBERON:0000059;2.10e-07;11!UBERON:0002114;2.40e-07;2!UBERON:0002110;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.01e-35,17;UBERON:0002108,2.00e-33,4;UBERON:0005409,9.50e-25,25;UBERON:0001155,7.75e-09,9;UBERON:0000059,2.16e-07,11;UBERON:0002114,2.32e-07,2;UBERON:0002110,2.63e-07,3;UBERON:0006242,2.63e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4798702628603,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,1.06149077404007,1.22206028986725,0,0,0,0,0,0,0,0,0,0,6.04953580243319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529536760149002,0.451961481561065,0,0,0,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,2.21577286947635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.63151607359928,0,0,0,0,0,0,0,0,0,0,11.4217753999758,10.053739783182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.34832208618481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0,0,0,0.573777643141411,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000451240,p1@uc003ste.2 | |||
}} |
Revision as of 15:47, 22 January 2014
Short description: | p1@ENST00000451240, p1@uc003ste.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000451240_5end, CAGE_peak_1_at_uc003ste.2_5end |
Coexpression cluster: | C794_small_signet_adenocarcinoma_colon_Hepatocyte_gall_liver |
Association with transcript: | 264bp_to_ENST00000451240, uc003ste.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.01e-35 | 17 |
small intestine | 2.00e-33 | 4 |
gastrointestinal system | 9.50e-25 | 25 |
colon | 7.75e-09 | 9 |
large intestine | 2.16e-07 | 11 |
duodenum | 2.32e-07 | 2 |
gallbladder | 2.63e-07 | 3 |
gall bladder primordium | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.89e-10 | 2 |