FFCP PHASE1:Hg19::chr7:56119096..56119152,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5723 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9577 | |||
|TSSclassifier=strong | |||
|UniProt=P78330 | |||
|association_with_transcript=0bp_to_ENST00000424596,ENST00000437355_5end | |||
|description=CAGE_peak_2_at_PSPH_5end | |||
|id=chr7:56119096..56119152,- | |||
|ontology_enrichment_celltype=CL:0000066!1.01e-25!254;CL:0002321!5.34e-25!248;CL:0000220!8.06e-25!246;CL:0000012!1.76e-19!682;CL:0000548!1.80e-19!679;CL:0000004!1.80e-19!679;CL:0000255!1.80e-19!679;CL:0000076!3.62e-12!62;CL:0000055!5.47e-12!180;CL:0000222!2.51e-09!119;CL:0000144!2.55e-08!625;CL:0000003!3.90e-08!722;CL:0000333!4.64e-08!41;CL:0000221!1.13e-07!71;CL:0000223!2.20e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.70e-26,253;CL:0002321,3.33e-25,250;CL:0000076,2.20e-12,63;CL:0000222,1.94e-09,121;CL:0000333,4.47e-08,41;CL:0000221,7.37e-08,72;CL:0000223,3.19e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.92e-26!239;DOID:162!8.07e-25!235;DOID:0050687!1.49e-15!143;DOID:305!6.22e-14!106;DOID:0050686!9.38e-10!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.06e-26,239;DOID:162,8.46e-25,235;DOID:0050687,1.62e-15,143;DOID:305,5.82e-14,106;DOID:0050686,8.97e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.87e-12!238;UBERON:0009142!3.87e-12!238;UBERON:0002100!1.19e-09!216;UBERON:0000481!5.77e-09!347;UBERON:0005177!1.76e-07!107;UBERON:0000475!3.76e-07!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.96e-09,199;UBERON:0000490,2.55e-08,148;UBERON:0003104,4.82e-08,160;UBERON:0009142,4.82e-08,160;UBERON:0005177,2.14e-07,101 | |||
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| |||
|short_description=p2@PSPH | |||
}} |
Revision as of 17:07, 22 January 2014
Short description: | p2@PSPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PSPH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424596, ENST00000437355_5end |
EntrezGene: | PSPH |
HGNC: | 9577 |
UniProt: | P78330 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.70e-26 | 253 |
embryonic cell | 3.33e-25 | 250 |
squamous epithelial cell | 2.20e-12 | 63 |
mesodermal cell | 1.94e-09 | 121 |
migratory neural crest cell | 4.47e-08 | 41 |
ectodermal cell | 7.37e-08 | 72 |
endodermal cell | 3.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.96e-09 | 199 |
unilaminar epithelium | 2.55e-08 | 148 |
mesenchyme | 4.82e-08 | 160 |
entire embryonic mesenchyme | 4.82e-08 | 160 |
trunk region element | 2.14e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.06e-26 | 239 |
cancer | 8.46e-25 | 235 |
cell type cancer | 1.62e-15 | 143 |
carcinoma | 5.82e-14 | 106 |
organ system cancer | 8.97e-10 | 137 |