FFCP PHASE1:Hg19::chr7:136759451..136759469,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C679 | |||
|description=CAGE_peak_at_chr7:136759451..136759469,+ | |||
|id=chr7:136759451..136759469,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.44e-15!75;CL:0000055!9.92e-12!180;CL:0002620!2.82e-11!23;CL:0002622!9.80e-10!3;CL:0002504!1.07e-09!3;CL:1000279!1.07e-09!3;CL:1000280!1.07e-09!3;CL:0002579!3.62e-09!3;CL:0002195!3.17e-07!2;CL:0002571!3.17e-07!2;CL:1000487!5.96e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002622;1.49e-35;3!CL:0002195;3.44e-25;2!CL:0002571;3.44e-25;2!CL:0002504;5.98e-17;3!CL:1000279;5.98e-17;3!CL:1000280;5.98e-17;3!CL:0002568;2.78e-13;1!CL:0000511;8.15e-13;1!CL:0002625;8.15e-13;1!CL:0000222;8.15e-13;1!CL:0000216;8.15e-13;1!CL:1000487;2.82e-07;2!CL:0002554;3.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.11e-35,3;CL:0002195,3.44e-25,2;CL:0002571,3.44e-25,2;CL:0002504,5.30e-17,3;CL:1000279,5.30e-17,3;CL:1000280,5.30e-17,3;CL:0002568,2.95e-13,1;CL:0000511,6.06e-13,1;CL:0002625,6.06e-13,1;CL:0000216,6.06e-13,1;CL:1000487,3.09e-07,2;CL:0002554,3.48e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;4.83e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004122!3.12e-11!15;UBERON:0000162!2.65e-09!14;UBERON:0001353!2.65e-09!14;UBERON:0000163!2.65e-09!14;UBERON:0006866!2.65e-09!14;UBERON:0000164!2.65e-09!14;UBERON:0000931!2.65e-09!14;UBERON:0003102!7.19e-08!95;UBERON:0003688!1.89e-07!6;UBERON:0002358!1.89e-07!6;UBERON:0003684!1.89e-07!6;UBERON:0001178!1.89e-07!6;UBERON:0005256!6.22e-07!143;UBERON:0002100!8.12e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.38e-17;11!UBERON:0010147;2.38e-17;11!UBERON:0003937;6.27e-16;12!UBERON:0005399;6.27e-16;12!UBERON:0003101;3.09e-13;22!UBERON:0000079;3.09e-13;22!UBERON:0007195;4.49e-13;1!UBERON:0001136;8.15e-13;1!UBERON:0001343;8.15e-13;1!UBERON:0004910;8.15e-13;1!UBERON:0004813;8.15e-13;1!UBERON:0000077;3.35e-07;27!UBERON:0004909;4.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004122,1.79e-19,15;UBERON:0002367,2.28e-17,11;UBERON:0010147,2.28e-17,11;UBERON:0009846,2.28e-17,11;UBERON:0003353,2.28e-17,11;UBERON:0004902,2.28e-17,11;UBERON:0003820,2.28e-17,11;UBERON:0009847,2.28e-17,11;UBERON:0003937,6.03e-16,12;UBERON:0005399,6.03e-16,12;UBERON:0000162,1.04e-13,14;UBERON:0001353,1.04e-13,14;UBERON:0000163,1.04e-13,14;UBERON:0006866,1.04e-13,14;UBERON:0000164,1.04e-13,14;UBERON:0000931,1.04e-13,14;UBERON:0003101,2.82e-13,22;UBERON:0000079,2.82e-13,22;UBERON:0007195,4.77e-13,1;UBERON:0001136,6.06e-13,1;UBERON:0001343,6.06e-13,1;UBERON:0004910,6.06e-13,1;UBERON:0005154,6.06e-13,1;UBERON:0005295,6.06e-13,1;UBERON:0004813,6.06e-13,1;UBERON:0005297,6.06e-13,1;UBERON:0005294,6.06e-13,1;UBERON:0010141,6.06e-13,1;UBERON:0005891,6.06e-13,1;UBERON:0003064,2.04e-10,28;UBERON:0001046,3.64e-10,19;UBERON:0003929,3.93e-10,54;UBERON:0005256,2.11e-08,122;UBERON:0000490,3.51e-08,148;UBERON:0003104,1.81e-07,160;UBERON:0009142,1.81e-07,160;UBERON:0004909,4.17e-07,2;UBERON:0004921,5.46e-07,118;UBERON:0002530,6.95e-07,59 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73048408581408,0,0,0.125118519871964,0.554128230968366,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0.206105058476878,0.515281080091258,0.37223371266318,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61960804121778,0,0,0.797814349754612,0,0,0,0,18.444161181901,0,0,0,13.5048940522167,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.384417447767103,1.02341449813341,0.804269605718038,0,0,0,0,0,0.232420756919918,0,0,0,3.67406234126742,2.91345868810747,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.719489830333259,7.96157386234559,3.88780927740765,0,0,0,0,0,0,0.9554993798559,3.11091950298168,0,1.10273068709225,0,0,0,0,0,0,0,0.573645408816206,0.294747123039363,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.450772826991655,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1437183414724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr7:136759451..136759469,+ | |||
}} |
Revision as of 19:31, 22 January 2014
Short description: | p@chr7:136759451..136759469, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:136759451..136759469, + |
Coexpression cluster: | C679_Mesenchymal_Smooth_Cardiac_Hair_Fibroblast_Mesothelial_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.11e-35 | 3 |
hepatic stem cell | 3.44e-25 | 2 |
hepatic mesenchymal stem cell | 3.44e-25 | 2 |
enteric smooth muscle cell | 5.30e-17 | 3 |
smooth muscle cell of large intestine | 5.30e-17 | 3 |
smooth muscle cell of colon | 5.30e-17 | 3 |
mesenchymal stem cell of Wharton's jelly | 2.95e-13 | 1 |
androgen binding protein secreting cell | 6.06e-13 | 1 |
seminiferous tubule epithelial cell | 6.06e-13 | 1 |
Sertoli cell | 6.06e-13 | 1 |
smooth muscle cell of prostate | 3.09e-07 | 2 |
fibroblast of lymphatic vessel | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.42e-07 | 2 |