FFCP PHASE1:Hg19::chr8:73163971..73163975,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=392232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-102bp_to_NR_033867_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_1_at_LOC392232_5end | |||
|id=chr8:73163971..73163975,- | |||
|ontology_enrichment_celltype=CL:0000242!1.27e-16!2;CL:0000312!3.57e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.60e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.30e-19!10;DOID:169!3.15e-12!6;DOID:3095!8.02e-09!22;DOID:2994!8.02e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:171;1.10e-59;10!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22!DOID:169;2.45e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.10e-59,10;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22;DOID:169,2.45e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001950!3.84e-22!20;UBERON:0001869!2.54e-21!32;UBERON:0002619!3.95e-20!22;UBERON:0001893!5.16e-20!34;UBERON:0000956!1.09e-17!25;UBERON:0000203!1.09e-17!25;UBERON:0002791!1.03e-16!33;UBERON:0002780!2.04e-16!41;UBERON:0001890!2.04e-16!41;UBERON:0006240!2.04e-16!41;UBERON:0002020!3.36e-16!34;UBERON:0003528!3.36e-16!34;UBERON:0003080!5.35e-16!42;UBERON:0000924!1.32e-15!173;UBERON:0006601!1.32e-15!173;UBERON:0000073!6.99e-15!94;UBERON:0001016!6.99e-15!94;UBERON:0000013!1.45e-14!5;UBERON:0002410!1.45e-14!5;UBERON:0001872!2.01e-14!5;UBERON:0004121!1.27e-12!169;UBERON:0000200!6.49e-12!6;UBERON:0002346!6.74e-12!90;UBERON:0001049!1.88e-11!57;UBERON:0005068!1.88e-11!57;UBERON:0006241!1.88e-11!57;UBERON:0007135!1.88e-11!57;UBERON:0000955!5.12e-11!69;UBERON:0006238!5.12e-11!69;UBERON:0002616!5.12e-11!59;UBERON:0001017!6.89e-11!82;UBERON:0003056!1.31e-10!61;UBERON:0005743!2.67e-10!86;UBERON:0002022!4.54e-09!1;UBERON:0007190!6.72e-09!1;UBERON:0002581!7.27e-09!1;UBERON:0007023!7.82e-09!115;UBERON:0002902!9.91e-09!1;UBERON:0009899!9.91e-09!1;UBERON:0003075!1.04e-08!86;UBERON:0007284!1.04e-08!86;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0000010!2.56e-08!8;UBERON:0000033!5.98e-08!123;UBERON:0000153!1.76e-07!129;UBERON:0007811!1.76e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.35e-66;4!UBERON:0000923;3.35e-66;4!UBERON:0010316;3.35e-66;4!UBERON:0005291;3.35e-66;4!UBERON:0002050;2.87e-53;5!UBERON:0005423;2.87e-53;5!UBERON:0000013;1.60e-14;5!UBERON:0002410;1.60e-14;5!UBERON:0000010;1.12e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.60e-14,5;UBERON:0002410,1.60e-14,5;UBERON:0000010,1.12e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,6.77099756790486,1.01839517972415,0,8.30369620535315,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC392232 | |||
}} |
Revision as of 22:31, 22 January 2014
Short description: | p1@LOC392232 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC392232_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -102bp_to_NR_033867_5end |
EntrezGene: | LOC392232 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.60e-14 | 5 |
autonomic nervous system | 1.60e-14 | 5 |
peripheral nervous system | 1.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.10e-59 | 10 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |
neuroendocrine tumor | 2.45e-12 | 6 |