FFCP PHASE1:Hg19::chr8:101225230..101225320,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11212 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000523302_5end | |||
|description=CAGE_peak_1_at_SPAG1_5end | |||
|id=chr8:101225230..101225320,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.02e-14!254;CL:0002076!6.16e-12!43;CL:0000223!1.12e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.08e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.34e-14,253;CL:0002076,5.03e-13,42;CL:0000223,1.89e-09,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.48e-17!106;DOID:0050687!1.23e-12!143;DOID:162!9.19e-10!235;DOID:14566!1.13e-09!239;DOID:1749!1.80e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.38e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.63e-17,106;DOID:0050687,4.00e-12,143;DOID:162,1.09e-09,235;DOID:14566,1.41e-09,239;DOID:1749,1.91e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000065!1.31e-08!53;UBERON:0000072!3.02e-08!46;UBERON:0004119!1.35e-07!169;UBERON:0000925!1.35e-07!169;UBERON:0006595!1.35e-07!169;UBERON:0001004!1.72e-07!72 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.07e-08,160;UBERON:0000925,1.07e-08,160;UBERON:0006595,1.07e-08,160;UBERON:0000065,3.48e-08,54;UBERON:0000072,7.84e-08,47;UBERON:0004921,1.60e-07,118;UBERON:0001007,1.84e-07,145;UBERON:0001555,1.84e-07,145;UBERON:0007026,1.84e-07,145;UBERON:0001004,5.13e-07,74;UBERON:0008947,9.16e-07,38;UBERON:0003258,9.16e-07,38 | |||
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| |||
|short_description=p1@SPAG1 | |||
}} |
Revision as of 23:04, 22 January 2014
Short description: | p1@SPAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPAG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000523302_5end |
EntrezGene: | SPAG1 |
HGNC: | 11212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.34e-14 | 253 |
endo-epithelial cell | 5.03e-13 | 42 |
endodermal cell | 1.89e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.07e-08 | 160 |
endoderm | 1.07e-08 | 160 |
presumptive endoderm | 1.07e-08 | 160 |
respiratory tract | 3.48e-08 | 54 |
segment of respiratory tract | 7.84e-08 | 47 |
subdivision of digestive tract | 1.60e-07 | 118 |
digestive system | 1.84e-07 | 145 |
digestive tract | 1.84e-07 | 145 |
primitive gut | 1.84e-07 | 145 |
respiratory system | 5.13e-07 | 74 |
respiratory primordium | 9.16e-07 | 38 |
endoderm of foregut | 9.16e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.63e-17 | 106 |
cell type cancer | 4.00e-12 | 143 |
cancer | 1.09e-09 | 235 |
disease of cellular proliferation | 1.41e-09 | 239 |
squamous cell carcinoma | 1.91e-07 | 14 |