FFCP PHASE1:Hg19::chr9:102669358..102669378,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-475bp_to_ENST00000529965,NR_038853,uc004baj.3_5end | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_1_at_LOC441461_5end | |||
|id=chr9:102669358..102669378,- | |||
|ontology_enrichment_celltype=CL:0000838!1.67e-21!52;CL:0000542!9.36e-21!53;CL:0000051!9.36e-21!53;CL:0000738!6.39e-18!140;CL:0000084!1.61e-15!25;CL:0000827!1.61e-15!25;CL:0000791!1.99e-14!18;CL:0000789!1.99e-14!18;CL:0002420!1.99e-14!18;CL:0002419!1.99e-14!18;CL:0000790!1.99e-14!18;CL:0000037!7.43e-14!172;CL:0000566!7.43e-14!172;CL:0000988!1.85e-12!182;CL:0002087!2.18e-12!119;CL:0002031!3.00e-11!124;CL:0002032!8.95e-11!165;CL:0000837!8.95e-11!165;CL:0000625!5.56e-09!11;CL:0000624!3.52e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.83e-21;6!CL:0000791;4.20e-21;18!CL:0000789;4.20e-21;18!CL:0002419;4.20e-21;18!CL:0000084;3.06e-17;25!CL:0000542;4.82e-14;53!CL:0000898;1.67e-11;3!CL:0000623;4.48e-11;3!CL:0000226;9.48e-11;3!CL:0000842;9.48e-11;3!CL:0000094;1.35e-09;8!CL:0000815;3.37e-08;2!CL:0000792;3.37e-08;2!CL:0002677;3.37e-08;2!CL:0000625;2.31e-07;11!CL:0000771;2.58e-07;2!CL:0000081;6.81e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.83e-24,136;CL:0000838,1.59e-23,52;CL:0000542,5.65e-23,53;CL:0000051,5.65e-23,53;CL:0000624,2.99e-21,6;CL:0000791,4.94e-21,18;CL:0000789,4.94e-21,18;CL:0002420,4.94e-21,18;CL:0002419,4.94e-21,18;CL:0000790,4.94e-21,18;CL:0000037,1.13e-18,168;CL:0000988,3.01e-17,177;CL:0000084,3.70e-17,25;CL:0000827,3.70e-17,25;CL:0002087,2.41e-15,115;CL:0002032,1.15e-12,161;CL:0000837,1.15e-12,161;CL:0002031,5.66e-12,120;CL:0000898,1.68e-11,3;CL:0000623,4.34e-11,3;CL:0000825,4.34e-11,3;CL:0000226,9.98e-11,3;CL:0000842,9.98e-11,3;CL:0000094,1.52e-09,8;CL:0000815,3.31e-08,2;CL:0000792,3.31e-08,2;CL:0002677,3.31e-08,2;CL:0000771,2.23e-07,2;CL:0000625,2.53e-07,11;CL:0000081,7.39e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.20e-21;18!CL:0000051;4.82e-14;53 | |||
|ontology_enrichment_disease=DOID:305!7.43e-12!106;DOID:0050687!1.02e-09!143;DOID:162!5.60e-08!235;DOID:14566!2.73e-07!239;DOID:1749!3.80e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,1.18009283054671,2.30297638858328,0.77408061658038,0,0,0,0.232401601740905,0.284338464974843,0.587200878669695,1.10799081706375,2.4065333696417,1.51907609501096,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,1.21079900526674,0,0.632924774881769,0.633765858935825,0,0,0.22465726229299,0,0.48217676009124,0,0.19891667719909,0,1.75996244461323,0,0.889509253863555,1.28019066769952,0.800791974072025,0,0,0.954053754535364,18.7840279806118,12.3319809767897,12.9972897562578,2.64342657158052,1.68152568894461,0,7.08155172409799,13.7553766962208,15.4201124249632,0.83593247695339,12.71096839871,9.46895611469466,3.89653456815823,0.779873198196215,9.13278313171995,7.3106185212595,4.60366568400527,0.896639238079726,0.780356085359269,0.164437904603676,1.10540007114339,0,9.04548035288569,7.49114318651197,9.40819714244791,0.339928028092699,12.6462762888634,10.6524508099615,7.08455137654608,0.95569624297229,0.651083453856419,0.950452044448374,1.20460095262218,0.127986611154418,1.24930726552346,0.473554504088034,0.821127996921047,8.26587647221403,13.3720097891754,8.25499102131954,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0.26591592103773,0.476981248610684,2.85997455390064,2.97166001063652,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0.590789906681404,2.20731549707325,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,6.5020150866636,9.05635814409973,7.44389610422541,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,3.10152039184331,6.25571182373989,4.26910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0.721346064882224,0.426851060090485,0.159426272728822,0,0.191505370132367,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.222886768554957,0,0.47748896947538,0.296964680832639,0,0,0.281338832821026,0,0.329607748453519,0.844501632511974,0.19924798825107,0,0.755798243562828,0.20453736500431,0.246169610922139,0,0.539210106883961,0,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,0.344743373241465,0,0,0,0.361789315876224,0,0.774054819518572,0,0,0,0.278847488557207,0,0.113942055847001,0.23056390438806,0.269272933229316,0.54323685961004,0,0,0,2.04386596391473,0,0,0,0,0,0.37950746544837,0,0.210998064528027,0.326465616318295,0.989471500037586,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0.067401132980677,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,2.40517471063188,0.103688191397247,0,0,0.627865836814451,0,0.284609546029793,0.138674673013139,0.694238953340524,0.195984794828755,0.261177619741208,0,0,0.0967563312890851,0.438535902517113,0.246346371159628,0,0,0,0,0.397429223405979,0.126621591911757,0.391102765469606,0.0801588202515337,0,0.599428828746391,0.432271251462318,0.229073192331831,1.02956998717179,0.288109595976299,0.248505071130865,0,0.135904206073614,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0.429226048136571,0,0.134366944973453,0,2.32991899054908,0,0.0824158583811665,0.202210631562555,0,0,0,0,0.643012593860077,0.137539436597234,0,0.899895566206002,6.1904156364636,0,0.335434687599266,0.0788057072991982,0.104909176269996,0,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.26446520348538,0.171086837884329,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0.790446527591777,1.58330377895165,0.638341257770182,0,0,0,0,1.25643277000187,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0.553394539744923,0,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0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| |||
|short_description=p1@LOC441461 | |||
}} |
Revision as of 02:29, 23 January 2014
Short description: | p1@LOC441461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC441461_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | -475bp_to_ENST00000529965, NR_038853, uc004baj.3_5end |
EntrezGene: | LOC441461 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.83e-24 | 136 |
lymphoid lineage restricted progenitor cell | 1.59e-23 | 52 |
lymphocyte | 5.65e-23 | 53 |
common lymphoid progenitor | 5.65e-23 | 53 |
CD4-positive, alpha-beta T cell | 2.99e-21 | 6 |
mature alpha-beta T cell | 4.94e-21 | 18 |
alpha-beta T cell | 4.94e-21 | 18 |
immature T cell | 4.94e-21 | 18 |
mature T cell | 4.94e-21 | 18 |
immature alpha-beta T cell | 4.94e-21 | 18 |
hematopoietic stem cell | 1.13e-18 | 168 |
hematopoietic cell | 3.01e-17 | 177 |
T cell | 3.70e-17 | 25 |
pro-T cell | 3.70e-17 | 25 |
nongranular leukocyte | 2.41e-15 | 115 |
hematopoietic oligopotent progenitor cell | 1.15e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 5.66e-12 | 120 |
naive T cell | 1.68e-11 | 3 |
natural killer cell | 4.34e-11 | 3 |
pro-NK cell | 4.34e-11 | 3 |
single nucleate cell | 9.98e-11 | 3 |
mononuclear cell | 9.98e-11 | 3 |
granulocyte | 1.52e-09 | 8 |
regulatory T cell | 3.31e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.31e-08 | 2 |
naive regulatory T cell | 3.31e-08 | 2 |
eosinophil | 2.23e-07 | 2 |
CD8-positive, alpha-beta T cell | 2.53e-07 | 11 |
blood cell | 7.39e-07 | 11 |